Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC62Q6P9F0 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CCDC62Q6P9F0 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC62Q6P9F0 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC62Q6P9F0 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC62Q6P9F0 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC62Q6P9F0 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.69■□□□□ 0.74
CCDC62Q6P9F0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC62Q6P9F0 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC62Q6P9F0 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CCDC62Q6P9F0 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC62Q6P9F0 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.69■□□□□ 0.74
CCDC62Q6P9F0 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC62Q6P9F0 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC62Q6P9F0 AC108073.2-201ENST00000464002 357 ntBASIC19.69■□□□□ 0.74
CCDC62Q6P9F0 RPS15P9-201ENST00000494093 319 ntBASIC19.69■□□□□ 0.74
CCDC62Q6P9F0 AC002347.1-201ENST00000569543 541 ntBASIC19.69■□□□□ 0.74
CCDC62Q6P9F0 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC62Q6P9F0 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC62Q6P9F0 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC62Q6P9F0 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CCDC62Q6P9F0 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC62Q6P9F0 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC62Q6P9F0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC62Q6P9F0 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CCDC62Q6P9F0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC62Q6P9F0 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC62Q6P9F0 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC62Q6P9F0 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.69■□□□□ 0.74
CCDC62Q6P9F0 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC62Q6P9F0 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC62Q6P9F0 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC62Q6P9F0 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC62Q6P9F0 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC62Q6P9F0 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC62Q6P9F0 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC62Q6P9F0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC62Q6P9F0 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CCDC62Q6P9F0 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC62Q6P9F0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC62Q6P9F0 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC62Q6P9F0 FLJ13224-201ENST00000313737 1514 ntBASIC19.68■□□□□ 0.74
CCDC62Q6P9F0 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
CCDC62Q6P9F0 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC62Q6P9F0 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.68■□□□□ 0.74
CCDC62Q6P9F0 DNAJB3-201ENST00000446806 729 ntBASIC19.68■□□□□ 0.74
CCDC62Q6P9F0 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC62Q6P9F0 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC62Q6P9F0 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC62Q6P9F0 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC62Q6P9F0 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.68■□□□□ 0.74
CCDC62Q6P9F0 AL691403.2-201ENST00000618460 490 ntBASIC19.68■□□□□ 0.74
CCDC62Q6P9F0 BCL2-203ENST00000589955 5011 ntBASIC19.68■□□□□ 0.74
CCDC62Q6P9F0 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC62Q6P9F0 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CCDC62Q6P9F0 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC62Q6P9F0 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC62Q6P9F0 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC62Q6P9F0 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC62Q6P9F0 NEFHP1-201ENST00000412845 2629 ntBASIC19.68■□□□□ 0.74
CCDC62Q6P9F0 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC62Q6P9F0 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
CCDC62Q6P9F0 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC62Q6P9F0 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC62Q6P9F0 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC62Q6P9F0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC62Q6P9F0 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC62Q6P9F0 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC62Q6P9F0 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC62Q6P9F0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CCDC62Q6P9F0 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CCDC62Q6P9F0 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC62Q6P9F0 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC62Q6P9F0 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC62Q6P9F0 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC62Q6P9F0 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC62Q6P9F0 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC62Q6P9F0 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC62Q6P9F0 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.67■□□□□ 0.74
CCDC62Q6P9F0 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.67■□□□□ 0.74
CCDC62Q6P9F0 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CCDC62Q6P9F0 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CCDC62Q6P9F0 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC62Q6P9F0 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC62Q6P9F0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC62Q6P9F0 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC62Q6P9F0 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC62Q6P9F0 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC62Q6P9F0 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC62Q6P9F0 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC62Q6P9F0 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC62Q6P9F0 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC62Q6P9F0 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC62Q6P9F0 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC62Q6P9F0 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC62Q6P9F0 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC62Q6P9F0 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC62Q6P9F0 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC62Q6P9F0 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC62Q6P9F0 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms