Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF220Q5VTB9 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
RNF220Q5VTB9 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF220Q5VTB9 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF220Q5VTB9 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF220Q5VTB9 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RNF220Q5VTB9 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNF220Q5VTB9 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF220Q5VTB9 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.96■□□□□ 0.31
RNF220Q5VTB9 TSPY14P-201ENST00000303979 915 ntBASIC16.96■□□□□ 0.31
RNF220Q5VTB9 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF220Q5VTB9 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.96■□□□□ 0.31
RNF220Q5VTB9 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF220Q5VTB9 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
RNF220Q5VTB9 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNF220Q5VTB9 AC007663.1-201ENST00000438948 1240 ntBASIC16.96■□□□□ 0.31
RNF220Q5VTB9 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNF220Q5VTB9 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.96■□□□□ 0.31
RNF220Q5VTB9 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.96■□□□□ 0.31
RNF220Q5VTB9 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.96■□□□□ 0.31
RNF220Q5VTB9 MIR4497-201ENST00000583208 89 ntBASIC16.96■□□□□ 0.31
RNF220Q5VTB9 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RNF220Q5VTB9 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RNF220Q5VTB9 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF220Q5VTB9 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.96■□□□□ 0.31
RNF220Q5VTB9 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF220Q5VTB9 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
RNF220Q5VTB9 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF220Q5VTB9 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF220Q5VTB9 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
RNF220Q5VTB9 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
RNF220Q5VTB9 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RNF220Q5VTB9 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.96■□□□□ 0.3
RNF220Q5VTB9 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.96■□□□□ 0.3
RNF220Q5VTB9 AL163051.1-201ENST00000569214 1512 ntBASIC16.96■□□□□ 0.3
RNF220Q5VTB9 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
RNF220Q5VTB9 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RNF220Q5VTB9 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RNF220Q5VTB9 PAUPAR-201ENST00000630360 2965 ntBASIC16.95■□□□□ 0.3
RNF220Q5VTB9 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RNF220Q5VTB9 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
RNF220Q5VTB9 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RNF220Q5VTB9 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF220Q5VTB9 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RNF220Q5VTB9 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RNF220Q5VTB9 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF220Q5VTB9 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF220Q5VTB9 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RNF220Q5VTB9 GMCL1P1-201ENST00000463439 1581 ntBASIC16.95■□□□□ 0.3
RNF220Q5VTB9 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF220Q5VTB9 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF220Q5VTB9 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
RNF220Q5VTB9 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RNF220Q5VTB9 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF220Q5VTB9 KRT18P23-201ENST00000435622 1283 ntBASIC16.95■□□□□ 0.3
RNF220Q5VTB9 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.95■□□□□ 0.3
RNF220Q5VTB9 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF220Q5VTB9 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RNF220Q5VTB9 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.95■□□□□ 0.3
RNF220Q5VTB9 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.95■□□□□ 0.3
RNF220Q5VTB9 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF220Q5VTB9 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.95■□□□□ 0.3
RNF220Q5VTB9 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.95■□□□□ 0.3
RNF220Q5VTB9 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
RNF220Q5VTB9 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF220Q5VTB9 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF220Q5VTB9 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RNF220Q5VTB9 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RNF220Q5VTB9 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RNF220Q5VTB9 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.95■□□□□ 0.3
RNF220Q5VTB9 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF220Q5VTB9 AC105917.1-201ENST00000506637 2539 ntBASIC16.95■□□□□ 0.3
RNF220Q5VTB9 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF220Q5VTB9 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF220Q5VTB9 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RNF220Q5VTB9 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.95■□□□□ 0.3
RNF220Q5VTB9 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF220Q5VTB9 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RNF220Q5VTB9 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF220Q5VTB9 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
RNF220Q5VTB9 AC009102.3-201ENST00000623118 1491 ntBASIC16.94■□□□□ 0.3
RNF220Q5VTB9 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.94■□□□□ 0.3
RNF220Q5VTB9 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RNF220Q5VTB9 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF220Q5VTB9 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RNF220Q5VTB9 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF220Q5VTB9 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF220Q5VTB9 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF220Q5VTB9 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RNF220Q5VTB9 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RNF220Q5VTB9 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
RNF220Q5VTB9 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RNF220Q5VTB9 MIR149-201ENST00000384879 89 ntBASIC16.94■□□□□ 0.3
RNF220Q5VTB9 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RNF220Q5VTB9 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.94■□□□□ 0.3
RNF220Q5VTB9 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
RNF220Q5VTB9 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RNF220Q5VTB9 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF220Q5VTB9 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RNF220Q5VTB9 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms