Protein–RNA interactions for Protein: P56915

GSC, Homeobox protein goosecoid, humanhuman

Predicted RBP Predictions only

Length 257 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSCP56915 AC009533.2-201ENST00000543664 586 ntBASIC18.56■□□□□ 0.56
GSCP56915 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.56■□□□□ 0.56
GSCP56915 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.56■□□□□ 0.56
GSCP56915 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
GSCP56915 MIR3180-1-201ENST00000580374 94 ntBASIC18.56■□□□□ 0.56
GSCP56915 MIR3180-3-201ENST00000584616 94 ntBASIC18.56■□□□□ 0.56
GSCP56915 AL445228.2-201ENST00000605589 952 ntBASIC18.56■□□□□ 0.56
GSCP56915 NPAP1P7-201ENST00000613027 823 ntBASIC18.56■□□□□ 0.56
GSCP56915 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.56■□□□□ 0.56
GSCP56915 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
GSCP56915 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GSCP56915 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GSCP56915 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.56■□□□□ 0.56
GSCP56915 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
GSCP56915 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
GSCP56915 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.56■□□□□ 0.56
GSCP56915 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.56■□□□□ 0.56
GSCP56915 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
GSCP56915 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GSCP56915 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
GSCP56915 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GSCP56915 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
GSCP56915 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.55■□□□□ 0.56
GSCP56915 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GSCP56915 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.55■□□□□ 0.56
GSCP56915 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.55■□□□□ 0.56
GSCP56915 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
GSCP56915 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GSCP56915 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GSCP56915 FAM220CP-201ENST00000395253 831 ntBASIC18.55■□□□□ 0.56
GSCP56915 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.55■□□□□ 0.56
GSCP56915 AP002414.4-201ENST00000589764 1148 ntBASIC18.55■□□□□ 0.56
GSCP56915 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GSCP56915 AC011467.2-201ENST00000598425 242 ntBASIC18.55■□□□□ 0.56
GSCP56915 AC091076.1-201ENST00000610741 619 ntBASIC18.55■□□□□ 0.56
GSCP56915 AL358472.4-201ENST00000633140 710 ntBASIC18.55■□□□□ 0.56
GSCP56915 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.55■□□□□ 0.56
GSCP56915 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GSCP56915 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.55■□□□□ 0.56
GSCP56915 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
GSCP56915 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GSCP56915 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC18.55■□□□□ 0.56
GSCP56915 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.54■□□□□ 0.56
GSCP56915 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GSCP56915 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
GSCP56915 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GSCP56915 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GSCP56915 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GSCP56915 KRT18P1-202ENST00000452408 1331 ntBASIC18.54■□□□□ 0.56
GSCP56915 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GSCP56915 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GSCP56915 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GSCP56915 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
GSCP56915 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
GSCP56915 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.54■□□□□ 0.56
GSCP56915 AC068418.2-201ENST00000577309 3703 ntBASIC18.54■□□□□ 0.56
GSCP56915 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GSCP56915 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GSCP56915 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GSCP56915 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
GSCP56915 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.54■□□□□ 0.56
GSCP56915 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GSCP56915 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GSCP56915 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
GSCP56915 ATP5G2P1-201ENST00000433580 426 ntBASIC18.54■□□□□ 0.56
GSCP56915 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.54■□□□□ 0.56
GSCP56915 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.54■□□□□ 0.56
GSCP56915 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.54■□□□□ 0.56
GSCP56915 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.54■□□□□ 0.56
GSCP56915 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.54■□□□□ 0.56
GSCP56915 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.54■□□□□ 0.56
GSCP56915 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GSCP56915 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
GSCP56915 AC010331.1-201ENST00000611423 582 ntBASIC18.54■□□□□ 0.56
GSCP56915 AL139327.4-201ENST00000612362 153 ntBASIC18.54■□□□□ 0.56
GSCP56915 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
GSCP56915 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.54■□□□□ 0.56
GSCP56915 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
GSCP56915 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GSCP56915 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GSCP56915 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GSCP56915 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
GSCP56915 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
GSCP56915 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GSCP56915 LYSMD4-203ENST00000378904 2122 ntBASIC18.53■□□□□ 0.56
GSCP56915 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.53■□□□□ 0.56
GSCP56915 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
GSCP56915 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GSCP56915 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
GSCP56915 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GSCP56915 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
GSCP56915 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GSCP56915 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GSCP56915 MYCLP1-201ENST00000372451 1075 ntBASIC18.53■□□□□ 0.56
GSCP56915 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GSCP56915 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.53■□□□□ 0.56
GSCP56915 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GSCP56915 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.53■□□□□ 0.56
GSCP56915 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GSCP56915 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms