Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GRIA1P42261 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
GRIA1P42261 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
GRIA1P42261 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GRIA1P42261 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GRIA1P42261 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GRIA1P42261 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
GRIA1P42261 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
GRIA1P42261 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GRIA1P42261 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GRIA1P42261 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.79■□□□□ 0.44
GRIA1P42261 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
GRIA1P42261 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
GRIA1P42261 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GRIA1P42261 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.79■□□□□ 0.44
GRIA1P42261 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.79■□□□□ 0.44
GRIA1P42261 KRT8P26-201ENST00000534154 1276 ntBASIC17.79■□□□□ 0.44
GRIA1P42261 AL049597.2-201ENST00000565575 961 ntBASIC17.79■□□□□ 0.44
GRIA1P42261 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.79■□□□□ 0.44
GRIA1P42261 AL138831.2-201ENST00000606564 490 ntBASIC17.79■□□□□ 0.44
GRIA1P42261 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GRIA1P42261 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GRIA1P42261 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
GRIA1P42261 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
GRIA1P42261 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GRIA1P42261 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GRIA1P42261 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GRIA1P42261 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GRIA1P42261 AC060834.1-201ENST00000443027 2032 ntBASIC17.79■□□□□ 0.44
GRIA1P42261 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.79■□□□□ 0.44
GRIA1P42261 AC084018.2-201ENST00000613093 2607 ntBASIC17.79■□□□□ 0.44
GRIA1P42261 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.79■□□□□ 0.44
GRIA1P42261 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GRIA1P42261 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GRIA1P42261 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GRIA1P42261 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.79■□□□□ 0.44
GRIA1P42261 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GRIA1P42261 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
GRIA1P42261 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.79■□□□□ 0.44
GRIA1P42261 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GRIA1P42261 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.78■□□□□ 0.44
GRIA1P42261 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GRIA1P42261 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GRIA1P42261 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.78■□□□□ 0.44
GRIA1P42261 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GRIA1P42261 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GRIA1P42261 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
GRIA1P42261 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GRIA1P42261 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
GRIA1P42261 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GRIA1P42261 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GRIA1P42261 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GRIA1P42261 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GRIA1P42261 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
GRIA1P42261 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.78■□□□□ 0.44
GRIA1P42261 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.78■□□□□ 0.44
GRIA1P42261 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.78■□□□□ 0.44
GRIA1P42261 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
GRIA1P42261 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
GRIA1P42261 AL121956.5-201ENST00000625261 221 ntBASIC17.78■□□□□ 0.44
GRIA1P42261 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.78■□□□□ 0.44
GRIA1P42261 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
GRIA1P42261 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
GRIA1P42261 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
GRIA1P42261 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.78■□□□□ 0.44
GRIA1P42261 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
GRIA1P42261 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.78■□□□□ 0.44
GRIA1P42261 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.78■□□□□ 0.44
GRIA1P42261 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GRIA1P42261 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
GRIA1P42261 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GRIA1P42261 AC016734.2-201ENST00000624325 1377 ntBASIC17.78■□□□□ 0.44
GRIA1P42261 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GRIA1P42261 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
GRIA1P42261 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GRIA1P42261 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.77■□□□□ 0.44
GRIA1P42261 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GRIA1P42261 AC116353.5-201ENST00000638148 1699 ntBASIC17.77■□□□□ 0.44
GRIA1P42261 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GRIA1P42261 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GRIA1P42261 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
GRIA1P42261 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GRIA1P42261 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.77■□□□□ 0.44
GRIA1P42261 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
GRIA1P42261 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GRIA1P42261 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GRIA1P42261 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
GRIA1P42261 SLC25A1P3-201ENST00000395415 828 ntBASIC17.77■□□□□ 0.44
GRIA1P42261 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.77■□□□□ 0.44
GRIA1P42261 AC002558.1-201ENST00000488906 803 ntBASIC17.77■□□□□ 0.44
GRIA1P42261 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.77■□□□□ 0.44
GRIA1P42261 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
GRIA1P42261 AC109462.3-201ENST00000573934 613 ntBASIC17.77■□□□□ 0.44
GRIA1P42261 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GRIA1P42261 AP005901.3-202ENST00000581653 237 ntBASIC17.77■□□□□ 0.44
GRIA1P42261 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.77■□□□□ 0.44
GRIA1P42261 AC090616.6-201ENST00000582640 721 ntBASIC17.77■□□□□ 0.44
GRIA1P42261 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.77■□□□□ 0.44
GRIA1P42261 AC016396.2-201ENST00000562575 1417 ntBASIC17.77■□□□□ 0.44
GRIA1P42261 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms