Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC22.13■■□□□ 1.13
COL15A1P39059 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL15A1P39059 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL15A1P39059 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL15A1P39059 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
COL15A1P39059 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
COL15A1P39059 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL15A1P39059 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC22.13■■□□□ 1.13
COL15A1P39059 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
COL15A1P39059 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC22.13■■□□□ 1.13
COL15A1P39059 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL15A1P39059 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL15A1P39059 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL15A1P39059 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
COL15A1P39059 MIR770-201ENST00000390219 98 ntBASIC22.12■■□□□ 1.13
COL15A1P39059 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC22.12■■□□□ 1.13
COL15A1P39059 RPL28-205ENST00000558131 444 ntTSL 5 BASIC22.12■■□□□ 1.13
COL15A1P39059 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC22.12■■□□□ 1.13
COL15A1P39059 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL15A1P39059 AC023141.13-201ENST00000604991 943 ntBASIC22.12■■□□□ 1.13
COL15A1P39059 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC22.12■■□□□ 1.13
COL15A1P39059 AL513210.1-201ENST00000629608 234 ntBASIC22.12■■□□□ 1.13
COL15A1P39059 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL15A1P39059 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL15A1P39059 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC22.12■■□□□ 1.13
COL15A1P39059 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC22.12■■□□□ 1.13
COL15A1P39059 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
COL15A1P39059 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
COL15A1P39059 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL15A1P39059 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL15A1P39059 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC22.12■■□□□ 1.13
COL15A1P39059 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
COL15A1P39059 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
COL15A1P39059 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
COL15A1P39059 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL15A1P39059 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
COL15A1P39059 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
COL15A1P39059 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL15A1P39059 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL15A1P39059 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
COL15A1P39059 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC22.12■■□□□ 1.13
COL15A1P39059 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL15A1P39059 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL15A1P39059 FAM8A3P-201ENST00000427218 844 ntBASIC22.12■■□□□ 1.13
COL15A1P39059 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
COL15A1P39059 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC22.12■■□□□ 1.13
COL15A1P39059 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
COL15A1P39059 CYB561-216ENST00000582297 897 ntTSL 3 BASIC22.12■■□□□ 1.13
COL15A1P39059 AC068137.2-201ENST00000605408 478 ntBASIC22.12■■□□□ 1.13
COL15A1P39059 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC22.12■■□□□ 1.13
COL15A1P39059 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL15A1P39059 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL15A1P39059 AC007064.4-201ENST00000637740 555 ntBASIC22.12■■□□□ 1.13
COL15A1P39059 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC22.11■■□□□ 1.13
COL15A1P39059 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC22.11■■□□□ 1.13
COL15A1P39059 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL15A1P39059 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL15A1P39059 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL15A1P39059 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC22.11■■□□□ 1.13
COL15A1P39059 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
COL15A1P39059 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
COL15A1P39059 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC22.11■■□□□ 1.13
COL15A1P39059 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
COL15A1P39059 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL15A1P39059 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
COL15A1P39059 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
COL15A1P39059 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC22.11■■□□□ 1.13
COL15A1P39059 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC22.11■■□□□ 1.13
COL15A1P39059 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
COL15A1P39059 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC22.11■■□□□ 1.13
COL15A1P39059 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC22.11■■□□□ 1.13
COL15A1P39059 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC22.11■■□□□ 1.13
COL15A1P39059 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
COL15A1P39059 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC22.11■■□□□ 1.13
COL15A1P39059 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
COL15A1P39059 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
COL15A1P39059 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
COL15A1P39059 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC22.1■■□□□ 1.13
COL15A1P39059 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
COL15A1P39059 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC22.1■■□□□ 1.13
COL15A1P39059 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
COL15A1P39059 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
COL15A1P39059 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
COL15A1P39059 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
COL15A1P39059 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
COL15A1P39059 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
COL15A1P39059 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC22.1■■□□□ 1.13
COL15A1P39059 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
COL15A1P39059 SYS1-203ENST00000414310 795 ntTSL 3 BASIC22.1■■□□□ 1.13
COL15A1P39059 ACTG1P4-201ENST00000425123 1122 ntBASIC22.1■■□□□ 1.13
COL15A1P39059 CXCL1P1-201ENST00000502804 216 ntBASIC22.1■■□□□ 1.13
COL15A1P39059 SPCS2P1-201ENST00000561636 679 ntBASIC22.1■■□□□ 1.13
COL15A1P39059 AC011467.4-201ENST00000594891 528 ntBASIC22.1■■□□□ 1.13
COL15A1P39059 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC22.1■■□□□ 1.13
COL15A1P39059 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
COL15A1P39059 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
COL15A1P39059 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
COL15A1P39059 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
COL15A1P39059 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
COL15A1P39059 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms