Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.37■□□□□ 0.53
LMNAP02545 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.37■□□□□ 0.53
LMNAP02545 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LMNAP02545 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
LMNAP02545 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.37■□□□□ 0.53
LMNAP02545 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LMNAP02545 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LMNAP02545 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.37■□□□□ 0.53
LMNAP02545 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LMNAP02545 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
LMNAP02545 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.37■□□□□ 0.53
LMNAP02545 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.37■□□□□ 0.53
LMNAP02545 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LMNAP02545 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LMNAP02545 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
LMNAP02545 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
LMNAP02545 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LMNAP02545 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
LMNAP02545 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LMNAP02545 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LMNAP02545 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LMNAP02545 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LMNAP02545 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LMNAP02545 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LMNAP02545 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
LMNAP02545 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LMNAP02545 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LMNAP02545 AC211486.1-202ENST00000416371 468 ntBASIC18.36■□□□□ 0.53
LMNAP02545 AC004832.2-201ENST00000426397 482 ntBASIC18.36■□□□□ 0.53
LMNAP02545 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LMNAP02545 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
LMNAP02545 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LMNAP02545 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
LMNAP02545 AC211476.1-201ENST00000503899 468 ntBASIC18.36■□□□□ 0.53
LMNAP02545 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.36■□□□□ 0.53
LMNAP02545 RFPL4AP1-201ENST00000530883 850 ntBASIC18.36■□□□□ 0.53
LMNAP02545 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.36■□□□□ 0.53
LMNAP02545 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.36■□□□□ 0.53
LMNAP02545 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LMNAP02545 HOXB1-202ENST00000577092 1414 ntBASIC18.36■□□□□ 0.53
LMNAP02545 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.36■□□□□ 0.53
LMNAP02545 Z83851.2-201ENST00000609564 659 ntBASIC18.36■□□□□ 0.53
LMNAP02545 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LMNAP02545 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.36■□□□□ 0.53
LMNAP02545 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.36■□□□□ 0.53
LMNAP02545 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LMNAP02545 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
LMNAP02545 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LMNAP02545 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.35■□□□□ 0.53
LMNAP02545 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LMNAP02545 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.35■□□□□ 0.53
LMNAP02545 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
LMNAP02545 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LMNAP02545 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LMNAP02545 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LMNAP02545 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
LMNAP02545 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LMNAP02545 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LMNAP02545 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LMNAP02545 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LMNAP02545 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.35■□□□□ 0.53
LMNAP02545 SLC25A6P5-201ENST00000435663 894 ntBASIC18.35■□□□□ 0.53
LMNAP02545 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.35■□□□□ 0.53
LMNAP02545 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LMNAP02545 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LMNAP02545 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.35■□□□□ 0.53
LMNAP02545 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.35■□□□□ 0.53
LMNAP02545 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.35■□□□□ 0.53
LMNAP02545 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LMNAP02545 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
LMNAP02545 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
LMNAP02545 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LMNAP02545 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.35■□□□□ 0.53
LMNAP02545 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LMNAP02545 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
LMNAP02545 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.35■□□□□ 0.53
LMNAP02545 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LMNAP02545 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
LMNAP02545 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LMNAP02545 AC084018.2-201ENST00000613093 2607 ntBASIC18.35■□□□□ 0.53
LMNAP02545 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LMNAP02545 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMNAP02545 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LMNAP02545 HLA-J-201ENST00000462773 1622 ntBASIC18.34■□□□□ 0.53
LMNAP02545 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
LMNAP02545 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.34■□□□□ 0.53
LMNAP02545 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMNAP02545 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LMNAP02545 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LMNAP02545 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMNAP02545 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMNAP02545 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMNAP02545 KRT8P3-201ENST00000519669 1449 ntBASIC18.34■□□□□ 0.53
LMNAP02545 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.34■□□□□ 0.53
LMNAP02545 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
LMNAP02545 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMNAP02545 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMNAP02545 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
LMNAP02545 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
LMNAP02545 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms