Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USP1O94782 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
USP1O94782 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP1O94782 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
USP1O94782 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP1O94782 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP1O94782 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP1O94782 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
USP1O94782 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP1O94782 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.8■□□□□ 0.44
USP1O94782 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP1O94782 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP1O94782 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
USP1O94782 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.8■□□□□ 0.44
USP1O94782 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
USP1O94782 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.8■□□□□ 0.44
USP1O94782 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP1O94782 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
USP1O94782 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
USP1O94782 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
USP1O94782 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP1O94782 AC096633.1-201ENST00000422446 749 ntBASIC17.8■□□□□ 0.44
USP1O94782 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.8■□□□□ 0.44
USP1O94782 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.8■□□□□ 0.44
USP1O94782 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP1O94782 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.8■□□□□ 0.44
USP1O94782 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
USP1O94782 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.8■□□□□ 0.44
USP1O94782 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
USP1O94782 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.8■□□□□ 0.44
USP1O94782 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.8■□□□□ 0.44
USP1O94782 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP1O94782 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP1O94782 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP1O94782 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP1O94782 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
USP1O94782 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.8■□□□□ 0.44
USP1O94782 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP1O94782 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
USP1O94782 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
USP1O94782 LINC01311-201ENST00000565162 1445 ntBASIC17.8■□□□□ 0.44
USP1O94782 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP1O94782 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
USP1O94782 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
USP1O94782 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.79■□□□□ 0.44
USP1O94782 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
USP1O94782 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
USP1O94782 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
USP1O94782 AC011676.5-201ENST00000624864 2660 ntBASIC17.79■□□□□ 0.44
USP1O94782 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
USP1O94782 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.79■□□□□ 0.44
USP1O94782 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP1O94782 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
USP1O94782 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
USP1O94782 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP1O94782 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP1O94782 NKILA-202ENST00000614771 2598 ntBASIC17.79■□□□□ 0.44
USP1O94782 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
USP1O94782 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP1O94782 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
USP1O94782 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP1O94782 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.79■□□□□ 0.44
USP1O94782 AC063952.2-201ENST00000498792 1227 ntBASIC17.79■□□□□ 0.44
USP1O94782 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.79■□□□□ 0.44
USP1O94782 LINC01238-205ENST00000567549 1107 ntBASIC17.79■□□□□ 0.44
USP1O94782 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.79■□□□□ 0.44
USP1O94782 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP1O94782 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
USP1O94782 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.79■□□□□ 0.44
USP1O94782 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
USP1O94782 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP1O94782 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP1O94782 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP1O94782 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.79■□□□□ 0.44
USP1O94782 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.79■□□□□ 0.44
USP1O94782 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
USP1O94782 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP1O94782 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP1O94782 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
USP1O94782 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
USP1O94782 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
USP1O94782 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP1O94782 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
USP1O94782 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
USP1O94782 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP1O94782 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP1O94782 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
USP1O94782 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP1O94782 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.78■□□□□ 0.44
USP1O94782 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
USP1O94782 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.78■□□□□ 0.44
USP1O94782 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.78■□□□□ 0.44
USP1O94782 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.78■□□□□ 0.44
USP1O94782 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.78■□□□□ 0.44
USP1O94782 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP1O94782 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP1O94782 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
USP1O94782 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.78■□□□□ 0.44
USP1O94782 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP1O94782 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms