Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
UPK1BO75841 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UPK1BO75841 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
UPK1BO75841 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.31■□□□□ 0.04
UPK1BO75841 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UPK1BO75841 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UPK1BO75841 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UPK1BO75841 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
UPK1BO75841 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UPK1BO75841 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UPK1BO75841 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.31■□□□□ 0.04
UPK1BO75841 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
UPK1BO75841 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UPK1BO75841 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UPK1BO75841 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
UPK1BO75841 PKD1P5-201ENST00000532415 10291 ntBASIC15.3■□□□□ 0.04
UPK1BO75841 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UPK1BO75841 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.3■□□□□ 0.04
UPK1BO75841 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.3■□□□□ 0.04
UPK1BO75841 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UPK1BO75841 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UPK1BO75841 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
UPK1BO75841 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
UPK1BO75841 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UPK1BO75841 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UPK1BO75841 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UPK1BO75841 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
UPK1BO75841 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC15.3■□□□□ 0.04
UPK1BO75841 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
UPK1BO75841 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.3■□□□□ 0.04
UPK1BO75841 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
UPK1BO75841 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC15.3■□□□□ 0.04
UPK1BO75841 TNRC18P2-201ENST00000417666 2714 ntBASIC15.3■□□□□ 0.04
UPK1BO75841 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.3■□□□□ 0.04
UPK1BO75841 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC15.3■□□□□ 0.04
UPK1BO75841 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.3■□□□□ 0.04
UPK1BO75841 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
UPK1BO75841 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UPK1BO75841 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UPK1BO75841 SUDS3P1-201ENST00000505831 966 ntBASIC15.3■□□□□ 0.04
UPK1BO75841 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UPK1BO75841 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UPK1BO75841 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UPK1BO75841 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UPK1BO75841 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
UPK1BO75841 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.3■□□□□ 0.04
UPK1BO75841 AC132938.6-201ENST00000623828 1655 ntBASIC15.3■□□□□ 0.04
UPK1BO75841 AC006058.4-201ENST00000624016 1670 ntBASIC15.3■□□□□ 0.04
UPK1BO75841 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UPK1BO75841 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
UPK1BO75841 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
UPK1BO75841 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.3■□□□□ 0.04
UPK1BO75841 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UPK1BO75841 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.3■□□□□ 0.04
UPK1BO75841 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.3■□□□□ 0.04
UPK1BO75841 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.29■□□□□ 0.04
UPK1BO75841 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UPK1BO75841 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.29■□□□□ 0.04
UPK1BO75841 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK1BO75841 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK1BO75841 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
UPK1BO75841 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
UPK1BO75841 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK1BO75841 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK1BO75841 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
UPK1BO75841 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC15.29■□□□□ 0.04
UPK1BO75841 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK1BO75841 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.29■□□□□ 0.04
UPK1BO75841 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.29■□□□□ 0.04
UPK1BO75841 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK1BO75841 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC15.29■□□□□ 0.04
UPK1BO75841 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK1BO75841 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK1BO75841 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UPK1BO75841 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK1BO75841 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK1BO75841 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC15.29■□□□□ 0.04
UPK1BO75841 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UPK1BO75841 AL512625.2-201ENST00000417533 625 ntBASIC15.29■□□□□ 0.04
UPK1BO75841 KRT18P11-201ENST00000435214 1283 ntBASIC15.29■□□□□ 0.04
UPK1BO75841 SPI1-203ENST00000533030 661 ntTSL 2 BASIC15.29■□□□□ 0.04
UPK1BO75841 SP2-202ENST00000613139 908 ntTSL 5 BASIC15.29■□□□□ 0.04
UPK1BO75841 AC116407.2-201ENST00000613639 860 ntBASIC15.29■□□□□ 0.04
UPK1BO75841 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK1BO75841 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK1BO75841 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
UPK1BO75841 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK1BO75841 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK1BO75841 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK1BO75841 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK1BO75841 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK1BO75841 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK1BO75841 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UPK1BO75841 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
UPK1BO75841 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
UPK1BO75841 AC009949.1-201ENST00000623048 1830 ntBASIC15.29■□□□□ 0.04
UPK1BO75841 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK1BO75841 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK1BO75841 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK1BO75841 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms