Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.46■□□□□ 0.87
PRPF40AO75400 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.45■□□□□ 0.87
PRPF40AO75400 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.87
PRPF40AO75400 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
PRPF40AO75400 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRPF40AO75400 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRPF40AO75400 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRPF40AO75400 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC20.45■□□□□ 0.86
PRPF40AO75400 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRPF40AO75400 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRPF40AO75400 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRPF40AO75400 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
PRPF40AO75400 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRPF40AO75400 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRPF40AO75400 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRPF40AO75400 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PRPF40AO75400 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.45■□□□□ 0.86
PRPF40AO75400 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.45■□□□□ 0.86
PRPF40AO75400 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.45■□□□□ 0.86
PRPF40AO75400 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.45■□□□□ 0.86
PRPF40AO75400 AC010653.2-201ENST00000623505 997 ntBASIC20.45■□□□□ 0.86
PRPF40AO75400 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PRPF40AO75400 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
PRPF40AO75400 LYSMD4-203ENST00000378904 2122 ntBASIC20.45■□□□□ 0.86
PRPF40AO75400 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PRPF40AO75400 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRPF40AO75400 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.45■□□□□ 0.86
PRPF40AO75400 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.45■□□□□ 0.86
PRPF40AO75400 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.45■□□□□ 0.86
PRPF40AO75400 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC20.45■□□□□ 0.86
PRPF40AO75400 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRPF40AO75400 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRPF40AO75400 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRPF40AO75400 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PRPF40AO75400 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRPF40AO75400 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRPF40AO75400 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRPF40AO75400 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
PRPF40AO75400 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRPF40AO75400 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRPF40AO75400 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PRPF40AO75400 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRPF40AO75400 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRPF40AO75400 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRPF40AO75400 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PRPF40AO75400 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PRPF40AO75400 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.44■□□□□ 0.86
PRPF40AO75400 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
PRPF40AO75400 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.44■□□□□ 0.86
PRPF40AO75400 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.44■□□□□ 0.86
PRPF40AO75400 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.44■□□□□ 0.86
PRPF40AO75400 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.44■□□□□ 0.86
PRPF40AO75400 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PRPF40AO75400 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRPF40AO75400 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.44■□□□□ 0.86
PRPF40AO75400 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.44■□□□□ 0.86
PRPF40AO75400 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
PRPF40AO75400 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
PRPF40AO75400 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
PRPF40AO75400 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRPF40AO75400 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRPF40AO75400 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PRPF40AO75400 LINC02199-201ENST00000506655 2702 ntBASIC20.44■□□□□ 0.86
PRPF40AO75400 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.44■□□□□ 0.86
PRPF40AO75400 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRPF40AO75400 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.44■□□□□ 0.86
PRPF40AO75400 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PRPF40AO75400 AC092338.2-201ENST00000568827 1415 ntBASIC20.44■□□□□ 0.86
PRPF40AO75400 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRPF40AO75400 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRPF40AO75400 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC20.44■□□□□ 0.86
PRPF40AO75400 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRPF40AO75400 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PRPF40AO75400 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.43■□□□□ 0.86
PRPF40AO75400 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRPF40AO75400 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PRPF40AO75400 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRPF40AO75400 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRPF40AO75400 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PRPF40AO75400 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRPF40AO75400 AC116353.5-201ENST00000638148 1699 ntBASIC20.43■□□□□ 0.86
PRPF40AO75400 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
PRPF40AO75400 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRPF40AO75400 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRPF40AO75400 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRPF40AO75400 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
PRPF40AO75400 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
PRPF40AO75400 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRPF40AO75400 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.43■□□□□ 0.86
PRPF40AO75400 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRPF40AO75400 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRPF40AO75400 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRPF40AO75400 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRPF40AO75400 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.43■□□□□ 0.86
PRPF40AO75400 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.43■□□□□ 0.86
PRPF40AO75400 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.43■□□□□ 0.86
PRPF40AO75400 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.43■□□□□ 0.86
PRPF40AO75400 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRPF40AO75400 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
PRPF40AO75400 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms