Protein–RNA interactions for Protein: O60936

NOL3, Nucleolar protein 3, humanhuman

Known RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOL3O60936 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NOL3O60936 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NOL3O60936 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NOL3O60936 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
NOL3O60936 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NOL3O60936 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NOL3O60936 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
NOL3O60936 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NOL3O60936 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NOL3O60936 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
NOL3O60936 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NOL3O60936 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NOL3O60936 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NOL3O60936 AC010980.2-201ENST00000587099 1412 ntBASIC16.12■□□□□ 0.17
NOL3O60936 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
NOL3O60936 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NOL3O60936 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NOL3O60936 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NOL3O60936 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NOL3O60936 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NOL3O60936 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.12■□□□□ 0.17
NOL3O60936 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NOL3O60936 CYP2T1P-201ENST00000432607 1285 ntBASIC16.12■□□□□ 0.17
NOL3O60936 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
NOL3O60936 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NOL3O60936 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.12■□□□□ 0.17
NOL3O60936 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NOL3O60936 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NOL3O60936 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.12■□□□□ 0.17
NOL3O60936 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
NOL3O60936 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
NOL3O60936 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NOL3O60936 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.12■□□□□ 0.17
NOL3O60936 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.12■□□□□ 0.17
NOL3O60936 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.12■□□□□ 0.17
NOL3O60936 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NOL3O60936 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
NOL3O60936 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NOL3O60936 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NOL3O60936 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.12■□□□□ 0.17
NOL3O60936 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
NOL3O60936 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NOL3O60936 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.12■□□□□ 0.17
NOL3O60936 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.12■□□□□ 0.17
NOL3O60936 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NOL3O60936 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NOL3O60936 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.11■□□□□ 0.17
NOL3O60936 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.11■□□□□ 0.17
NOL3O60936 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NOL3O60936 PAUPAR-201ENST00000630360 2965 ntBASIC16.11■□□□□ 0.17
NOL3O60936 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NOL3O60936 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NOL3O60936 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NOL3O60936 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.11■□□□□ 0.17
NOL3O60936 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.11■□□□□ 0.17
NOL3O60936 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.11■□□□□ 0.17
NOL3O60936 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NOL3O60936 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NOL3O60936 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NOL3O60936 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NOL3O60936 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NOL3O60936 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NOL3O60936 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NOL3O60936 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NOL3O60936 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NOL3O60936 AL121832.2-201ENST00000610979 668 ntBASIC16.11■□□□□ 0.17
NOL3O60936 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
NOL3O60936 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
NOL3O60936 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
NOL3O60936 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NOL3O60936 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NOL3O60936 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.11■□□□□ 0.17
NOL3O60936 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.11■□□□□ 0.17
NOL3O60936 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.11■□□□□ 0.17
NOL3O60936 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
NOL3O60936 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NOL3O60936 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NOL3O60936 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
NOL3O60936 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NOL3O60936 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NOL3O60936 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NOL3O60936 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.1■□□□□ 0.17
NOL3O60936 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.1■□□□□ 0.17
NOL3O60936 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NOL3O60936 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NOL3O60936 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NOL3O60936 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.1■□□□□ 0.17
NOL3O60936 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NOL3O60936 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
NOL3O60936 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NOL3O60936 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NOL3O60936 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.1■□□□□ 0.17
NOL3O60936 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NOL3O60936 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NOL3O60936 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NOL3O60936 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
NOL3O60936 AK1-201ENST00000223836 736 ntTSL 3 BASIC16.1■□□□□ 0.17
NOL3O60936 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NOL3O60936 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.1■□□□□ 0.17
NOL3O60936 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms