Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNAI2O43623 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNAI2O43623 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SNAI2O43623 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC13.19□□□□□ -0.3
SNAI2O43623 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.19□□□□□ -0.3
SNAI2O43623 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC13.19□□□□□ -0.3
SNAI2O43623 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC13.19□□□□□ -0.3
SNAI2O43623 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNAI2O43623 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNAI2O43623 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SNAI2O43623 MIR3180-4-201ENST00000582223 153 ntBASIC13.19□□□□□ -0.3
SNAI2O43623 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC13.19□□□□□ -0.3
SNAI2O43623 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SNAI2O43623 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNAI2O43623 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNAI2O43623 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.19□□□□□ -0.3
SNAI2O43623 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNAI2O43623 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SNAI2O43623 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNAI2O43623 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC13.19□□□□□ -0.3
SNAI2O43623 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNAI2O43623 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
SNAI2O43623 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
SNAI2O43623 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SNAI2O43623 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC13.19□□□□□ -0.3
SNAI2O43623 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
SNAI2O43623 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SNAI2O43623 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNAI2O43623 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.18□□□□□ -0.3
SNAI2O43623 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNAI2O43623 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNAI2O43623 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNAI2O43623 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC13.18□□□□□ -0.3
SNAI2O43623 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SNAI2O43623 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.18□□□□□ -0.3
SNAI2O43623 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SNAI2O43623 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNAI2O43623 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC13.18□□□□□ -0.3
SNAI2O43623 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNAI2O43623 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC13.18□□□□□ -0.3
SNAI2O43623 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.18□□□□□ -0.3
SNAI2O43623 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNAI2O43623 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC13.18□□□□□ -0.3
SNAI2O43623 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SNAI2O43623 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.18□□□□□ -0.3
SNAI2O43623 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SNAI2O43623 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC13.18□□□□□ -0.3
SNAI2O43623 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC13.18□□□□□ -0.3
SNAI2O43623 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC13.18□□□□□ -0.3
SNAI2O43623 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SNAI2O43623 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC13.18□□□□□ -0.3
SNAI2O43623 AC073648.6-201ENST00000641589 218 ntBASIC13.18□□□□□ -0.3
SNAI2O43623 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC13.18□□□□□ -0.3
SNAI2O43623 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
SNAI2O43623 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNAI2O43623 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.18□□□□□ -0.3
SNAI2O43623 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNAI2O43623 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNAI2O43623 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC13.18□□□□□ -0.3
SNAI2O43623 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.18□□□□□ -0.3
SNAI2O43623 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNAI2O43623 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC13.18□□□□□ -0.3
SNAI2O43623 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SNAI2O43623 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
SNAI2O43623 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC13.18□□□□□ -0.3
SNAI2O43623 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SNAI2O43623 C8orf49-201ENST00000525043 1968 ntBASIC13.18□□□□□ -0.3
SNAI2O43623 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC13.18□□□□□ -0.3
SNAI2O43623 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SNAI2O43623 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNAI2O43623 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNAI2O43623 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNAI2O43623 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.17□□□□□ -0.3
SNAI2O43623 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNAI2O43623 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNAI2O43623 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNAI2O43623 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNAI2O43623 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNAI2O43623 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC13.17□□□□□ -0.3
SNAI2O43623 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNAI2O43623 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNAI2O43623 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC13.17□□□□□ -0.3
SNAI2O43623 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SNAI2O43623 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNAI2O43623 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
SNAI2O43623 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNAI2O43623 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNAI2O43623 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNAI2O43623 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.17□□□□□ -0.3
SNAI2O43623 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SNAI2O43623 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
SNAI2O43623 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC13.17□□□□□ -0.3
SNAI2O43623 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC13.17□□□□□ -0.3
SNAI2O43623 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SNAI2O43623 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SNAI2O43623 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC13.17□□□□□ -0.3
SNAI2O43623 ADM-205ENST00000528544 586 ntTSL 2 BASIC13.17□□□□□ -0.3
SNAI2O43623 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC13.17□□□□□ -0.3
SNAI2O43623 SLC25A1P4-201ENST00000567977 778 ntBASIC13.17□□□□□ -0.3
SNAI2O43623 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms