Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RTL8CO15255 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RTL8CO15255 GID4-202ENST00000376345 1391 ntTSL 3 BASIC11.67□□□□□ -0.54
RTL8CO15255 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RTL8CO15255 GOLGA6L17P-202ENST00000614358 1398 ntBASIC11.67□□□□□ -0.54
RTL8CO15255 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
RTL8CO15255 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC11.66□□□□□ -0.54
RTL8CO15255 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
RTL8CO15255 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
RTL8CO15255 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
RTL8CO15255 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RTL8CO15255 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RTL8CO15255 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC11.66□□□□□ -0.54
RTL8CO15255 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
RTL8CO15255 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RTL8CO15255 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RTL8CO15255 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC11.66□□□□□ -0.54
RTL8CO15255 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RTL8CO15255 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
RTL8CO15255 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RTL8CO15255 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
RTL8CO15255 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
RTL8CO15255 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RTL8CO15255 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RTL8CO15255 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RTL8CO15255 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC11.66□□□□□ -0.54
RTL8CO15255 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RTL8CO15255 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
RTL8CO15255 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RTL8CO15255 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RTL8CO15255 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
RTL8CO15255 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
RTL8CO15255 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RTL8CO15255 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC11.66□□□□□ -0.54
RTL8CO15255 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RTL8CO15255 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC11.66□□□□□ -0.54
RTL8CO15255 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RTL8CO15255 SIGLEC30P-201ENST00000455569 941 ntBASIC11.66□□□□□ -0.54
RTL8CO15255 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RTL8CO15255 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC11.66□□□□□ -0.54
RTL8CO15255 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RTL8CO15255 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC11.66□□□□□ -0.54
RTL8CO15255 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC11.66□□□□□ -0.54
RTL8CO15255 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC11.66□□□□□ -0.54
RTL8CO15255 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC11.66□□□□□ -0.54
RTL8CO15255 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
RTL8CO15255 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
RTL8CO15255 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC11.66□□□□□ -0.54
RTL8CO15255 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC11.66□□□□□ -0.54
RTL8CO15255 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
RTL8CO15255 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RTL8CO15255 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RTL8CO15255 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
RTL8CO15255 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC11.66□□□□□ -0.54
RTL8CO15255 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RTL8CO15255 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RTL8CO15255 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RTL8CO15255 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RTL8CO15255 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC11.66□□□□□ -0.54
RTL8CO15255 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RTL8CO15255 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC11.66□□□□□ -0.54
RTL8CO15255 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
RTL8CO15255 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RTL8CO15255 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RTL8CO15255 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
RTL8CO15255 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RTL8CO15255 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RTL8CO15255 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
RTL8CO15255 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
RTL8CO15255 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RTL8CO15255 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC11.65□□□□□ -0.54
RTL8CO15255 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC11.65□□□□□ -0.54
RTL8CO15255 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RTL8CO15255 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
RTL8CO15255 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC11.65□□□□□ -0.54
RTL8CO15255 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RTL8CO15255 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RTL8CO15255 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
RTL8CO15255 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
RTL8CO15255 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RTL8CO15255 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
RTL8CO15255 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RTL8CO15255 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RTL8CO15255 AC003669.1-201ENST00000334569 611 ntBASIC11.65□□□□□ -0.54
RTL8CO15255 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RTL8CO15255 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
RTL8CO15255 CD99-202ENST00000381180 530 ntTSL 2 BASIC11.65□□□□□ -0.54
RTL8CO15255 PTMS-202ENST00000389462 773 ntTSL 2 BASIC11.65□□□□□ -0.54
RTL8CO15255 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
RTL8CO15255 RHOQP3-201ENST00000437982 621 ntBASIC11.65□□□□□ -0.54
RTL8CO15255 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC11.65□□□□□ -0.54
RTL8CO15255 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC11.65□□□□□ -0.54
RTL8CO15255 AC074386.1-202ENST00000463561 864 ntBASIC11.65□□□□□ -0.54
RTL8CO15255 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RTL8CO15255 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC11.65□□□□□ -0.54
RTL8CO15255 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC11.65□□□□□ -0.54
RTL8CO15255 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC11.65□□□□□ -0.54
RTL8CO15255 RPL28-205ENST00000558131 444 ntTSL 5 BASIC11.65□□□□□ -0.54
RTL8CO15255 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC11.65□□□□□ -0.54
RTL8CO15255 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC11.65□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms