Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC13.49□□□□□ -0.25
NDUFA4O00483 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.49□□□□□ -0.25
NDUFA4O00483 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA4O00483 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA4O00483 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC13.49□□□□□ -0.25
NDUFA4O00483 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA4O00483 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA4O00483 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA4O00483 LYSMD4-203ENST00000378904 2122 ntBASIC13.49□□□□□ -0.25
NDUFA4O00483 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
NDUFA4O00483 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA4O00483 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA4O00483 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA4O00483 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA4O00483 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA4O00483 TP73-AS1-210ENST00000637775 1455 ntBASIC13.48□□□□□ -0.25
NDUFA4O00483 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA4O00483 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA4O00483 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA4O00483 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC13.48□□□□□ -0.25
NDUFA4O00483 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA4O00483 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA4O00483 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC13.48□□□□□ -0.25
NDUFA4O00483 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA4O00483 IGHV3-47-201ENST00000425060 335 ntBASIC13.48□□□□□ -0.25
NDUFA4O00483 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
NDUFA4O00483 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC13.48□□□□□ -0.25
NDUFA4O00483 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA4O00483 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC13.48□□□□□ -0.25
NDUFA4O00483 AC096582.2-201ENST00000510860 516 ntBASIC13.48□□□□□ -0.25
NDUFA4O00483 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.48□□□□□ -0.25
NDUFA4O00483 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC13.48□□□□□ -0.25
NDUFA4O00483 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC13.48□□□□□ -0.25
NDUFA4O00483 AC093458.2-201ENST00000623150 629 ntBASIC13.48□□□□□ -0.25
NDUFA4O00483 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC13.48□□□□□ -0.25
NDUFA4O00483 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
NDUFA4O00483 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA4O00483 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC13.48□□□□□ -0.25
NDUFA4O00483 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA4O00483 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA4O00483 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
NDUFA4O00483 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC13.48□□□□□ -0.25
NDUFA4O00483 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA4O00483 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA4O00483 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13.48□□□□□ -0.25
NDUFA4O00483 AMT-250ENST00000637682 1823 ntTSL 5 BASIC13.48□□□□□ -0.25
NDUFA4O00483 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA4O00483 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
NDUFA4O00483 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA4O00483 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA4O00483 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA4O00483 SIRPAP1-201ENST00000448467 1770 ntBASIC13.48□□□□□ -0.25
NDUFA4O00483 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC13.47□□□□□ -0.25
NDUFA4O00483 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NDUFA4O00483 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC13.47□□□□□ -0.25
NDUFA4O00483 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
NDUFA4O00483 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
NDUFA4O00483 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
NDUFA4O00483 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NDUFA4O00483 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC13.47□□□□□ -0.25
NDUFA4O00483 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NDUFA4O00483 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NDUFA4O00483 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
NDUFA4O00483 FST-202ENST00000396947 2538 ntTSL 5 BASIC13.47□□□□□ -0.25
NDUFA4O00483 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
NDUFA4O00483 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NDUFA4O00483 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
NDUFA4O00483 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.25
NDUFA4O00483 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NDUFA4O00483 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC13.47□□□□□ -0.25
NDUFA4O00483 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NDUFA4O00483 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC13.47□□□□□ -0.25
NDUFA4O00483 UPK3BP1-201ENST00000428678 509 ntBASIC13.47□□□□□ -0.25
NDUFA4O00483 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
NDUFA4O00483 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NDUFA4O00483 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.47□□□□□ -0.25
NDUFA4O00483 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC13.47□□□□□ -0.25
NDUFA4O00483 COX5A-202ENST00000562233 441 ntTSL 3 BASIC13.47□□□□□ -0.25
NDUFA4O00483 COX5A-204ENST00000567270 579 ntTSL 3 BASIC13.47□□□□□ -0.25
NDUFA4O00483 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC13.47□□□□□ -0.25
NDUFA4O00483 AC092119.3-201ENST00000612618 583 ntBASIC13.47□□□□□ -0.25
NDUFA4O00483 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
NDUFA4O00483 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC13.47□□□□□ -0.25
NDUFA4O00483 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC13.47□□□□□ -0.25
NDUFA4O00483 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC13.47□□□□□ -0.25
NDUFA4O00483 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC13.47□□□□□ -0.25
NDUFA4O00483 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
NDUFA4O00483 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
NDUFA4O00483 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC13.47□□□□□ -0.25
NDUFA4O00483 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NDUFA4O00483 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NDUFA4O00483 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC13.46□□□□□ -0.25
NDUFA4O00483 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NDUFA4O00483 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NDUFA4O00483 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NDUFA4O00483 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NDUFA4O00483 AL049757.1-201ENST00000616842 1596 ntBASIC13.46□□□□□ -0.25
NDUFA4O00483 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC13.46□□□□□ -0.25
NDUFA4O00483 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC13.46□□□□□ -0.25
NDUFA4O00483 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms