Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 FUK-207ENST00000571514 3054 ntTSL 2 BASIC19.94■□□□□ 0.78
SPDYE4A6NLX3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.94■□□□□ 0.78
SPDYE4A6NLX3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SPDYE4A6NLX3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPDYE4A6NLX3 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
SPDYE4A6NLX3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SPDYE4A6NLX3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPDYE4A6NLX3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPDYE4A6NLX3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SPDYE4A6NLX3 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SPDYE4A6NLX3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPDYE4A6NLX3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SPDYE4A6NLX3 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.93■□□□□ 0.78
SPDYE4A6NLX3 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.93■□□□□ 0.78
SPDYE4A6NLX3 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPDYE4A6NLX3 MCCD1P1-208ENST00000445732 328 ntBASIC19.93■□□□□ 0.78
SPDYE4A6NLX3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.93■□□□□ 0.78
SPDYE4A6NLX3 AC011498.5-201ENST00000592027 486 ntBASIC19.93■□□□□ 0.78
SPDYE4A6NLX3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SPDYE4A6NLX3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.93■□□□□ 0.78
SPDYE4A6NLX3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPDYE4A6NLX3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SPDYE4A6NLX3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SPDYE4A6NLX3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.93■□□□□ 0.78
SPDYE4A6NLX3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPDYE4A6NLX3 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SPDYE4A6NLX3 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SPDYE4A6NLX3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.93■□□□□ 0.78
SPDYE4A6NLX3 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPDYE4A6NLX3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.93■□□□□ 0.78
SPDYE4A6NLX3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.93■□□□□ 0.78
SPDYE4A6NLX3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.93■□□□□ 0.78
SPDYE4A6NLX3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SPDYE4A6NLX3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.93■□□□□ 0.78
SPDYE4A6NLX3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPDYE4A6NLX3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPDYE4A6NLX3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
SPDYE4A6NLX3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPDYE4A6NLX3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.92■□□□□ 0.78
SPDYE4A6NLX3 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPDYE4A6NLX3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPDYE4A6NLX3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.92■□□□□ 0.78
SPDYE4A6NLX3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPDYE4A6NLX3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPDYE4A6NLX3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPDYE4A6NLX3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPDYE4A6NLX3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.92■□□□□ 0.78
SPDYE4A6NLX3 AC111152.3-201ENST00000569699 673 ntBASIC19.92■□□□□ 0.78
SPDYE4A6NLX3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPDYE4A6NLX3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPDYE4A6NLX3 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPDYE4A6NLX3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPDYE4A6NLX3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.92■□□□□ 0.78
SPDYE4A6NLX3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPDYE4A6NLX3 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPDYE4A6NLX3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SPDYE4A6NLX3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SPDYE4A6NLX3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.92■□□□□ 0.78
SPDYE4A6NLX3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.92■□□□□ 0.78
SPDYE4A6NLX3 HYMAI-201ENST00000635591 3347 ntBASIC19.92■□□□□ 0.78
SPDYE4A6NLX3 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPDYE4A6NLX3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.91■□□□□ 0.78
SPDYE4A6NLX3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SPDYE4A6NLX3 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPDYE4A6NLX3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
SPDYE4A6NLX3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPDYE4A6NLX3 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
SPDYE4A6NLX3 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.91■□□□□ 0.78
SPDYE4A6NLX3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SPDYE4A6NLX3 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.91■□□□□ 0.78
SPDYE4A6NLX3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC19.91■□□□□ 0.78
SPDYE4A6NLX3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SPDYE4A6NLX3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPDYE4A6NLX3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPDYE4A6NLX3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPDYE4A6NLX3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPDYE4A6NLX3 AC004870.1-201ENST00000315132 882 ntBASIC19.91■□□□□ 0.78
SPDYE4A6NLX3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPDYE4A6NLX3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPDYE4A6NLX3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SPDYE4A6NLX3 SPDYE13P-201ENST00000445314 798 ntBASIC19.91■□□□□ 0.78
SPDYE4A6NLX3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SPDYE4A6NLX3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.91■□□□□ 0.78
SPDYE4A6NLX3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.91■□□□□ 0.78
SPDYE4A6NLX3 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC19.91■□□□□ 0.78
SPDYE4A6NLX3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.91■□□□□ 0.78
SPDYE4A6NLX3 AC021321.1-201ENST00000607397 1113 ntBASIC19.91■□□□□ 0.78
SPDYE4A6NLX3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPDYE4A6NLX3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC19.91■□□□□ 0.78
SPDYE4A6NLX3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPDYE4A6NLX3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPDYE4A6NLX3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.91■□□□□ 0.78
SPDYE4A6NLX3 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPDYE4A6NLX3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.91■□□□□ 0.78
SPDYE4A6NLX3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPDYE4A6NLX3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SPDYE4A6NLX3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SPDYE4A6NLX3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SPDYE4A6NLX3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.91■□□□□ 0.78
SPDYE4A6NLX3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms