Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 AL353807.1-201ENST00000427475 662 ntBASIC12.39□□□□□ -0.43
LINC01546A6NGU7 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 FDX2-207ENST00000494368 584 ntTSL 4 BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 AC010240.3-201ENST00000607688 395 ntBASIC12.39□□□□□ -0.43
LINC01546A6NGU7 CR392000.1-201ENST00000624770 1228 ntBASIC12.39□□□□□ -0.43
LINC01546A6NGU7 AL023875.1-201ENST00000640777 796 ntBASIC12.39□□□□□ -0.43
LINC01546A6NGU7 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 AC022532.1-201ENST00000624563 1728 ntBASIC12.39□□□□□ -0.43
LINC01546A6NGU7 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 AMT-250ENST00000637682 1823 ntTSL 5 BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 KRT17P3-201ENST00000420566 1262 ntBASIC12.38□□□□□ -0.43
LINC01546A6NGU7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 AC002558.1-201ENST00000488906 803 ntBASIC12.38□□□□□ -0.43
LINC01546A6NGU7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 LY6E-205ENST00000519611 635 ntTSL 3 BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 AP002490.2-201ENST00000524791 560 ntBASIC12.38□□□□□ -0.43
LINC01546A6NGU7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 AC092364.2-201ENST00000596710 2692 ntBASIC12.38□□□□□ -0.43
LINC01546A6NGU7 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01546A6NGU7 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms