Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGC4Q9Y5F7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGC4Q9Y5F7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
PCDHGC4Q9Y5F7 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGC4Q9Y5F7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGC4Q9Y5F7 AC002558.1-201ENST00000488906 803 ntBASIC17.74■□□□□ 0.43
PCDHGC4Q9Y5F7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.74■□□□□ 0.43
PCDHGC4Q9Y5F7 IGHV3-52-201ENST00000519770 353 ntBASIC17.74■□□□□ 0.43
PCDHGC4Q9Y5F7 AF238378.1-201ENST00000526806 358 ntBASIC17.74■□□□□ 0.43
PCDHGC4Q9Y5F7 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.74■□□□□ 0.43
PCDHGC4Q9Y5F7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.74■□□□□ 0.43
PCDHGC4Q9Y5F7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHGC4Q9Y5F7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGC4Q9Y5F7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGC4Q9Y5F7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGC4Q9Y5F7 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGC4Q9Y5F7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGC4Q9Y5F7 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGC4Q9Y5F7 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PCDHGC4Q9Y5F7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGC4Q9Y5F7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGC4Q9Y5F7 PMPCAP1-201ENST00000508114 1576 ntBASIC17.74■□□□□ 0.43
PCDHGC4Q9Y5F7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGC4Q9Y5F7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGC4Q9Y5F7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGC4Q9Y5F7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGC4Q9Y5F7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PCDHGC4Q9Y5F7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGC4Q9Y5F7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHGC4Q9Y5F7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGC4Q9Y5F7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PCDHGC4Q9Y5F7 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PCDHGC4Q9Y5F7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PCDHGC4Q9Y5F7 PCDHB18P-201ENST00000524813 2368 ntBASIC17.73■□□□□ 0.43
PCDHGC4Q9Y5F7 AC132938.5-201ENST00000624980 1813 ntBASIC17.73■□□□□ 0.43
PCDHGC4Q9Y5F7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGC4Q9Y5F7 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGC4Q9Y5F7 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGC4Q9Y5F7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGC4Q9Y5F7 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHGC4Q9Y5F7 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGC4Q9Y5F7 SAPCD2P3-201ENST00000455031 850 ntBASIC17.73■□□□□ 0.43
PCDHGC4Q9Y5F7 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGC4Q9Y5F7 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.73■□□□□ 0.43
PCDHGC4Q9Y5F7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PCDHGC4Q9Y5F7 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGC4Q9Y5F7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGC4Q9Y5F7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.73■□□□□ 0.43
PCDHGC4Q9Y5F7 MTDHP3-201ENST00000594186 672 ntBASIC17.73■□□□□ 0.43
PCDHGC4Q9Y5F7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGC4Q9Y5F7 AL691432.3-201ENST00000621860 400 ntBASIC17.73■□□□□ 0.43
PCDHGC4Q9Y5F7 AC073592.5-201ENST00000624854 528 ntBASIC17.73■□□□□ 0.43
PCDHGC4Q9Y5F7 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHGC4Q9Y5F7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGC4Q9Y5F7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGC4Q9Y5F7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGC4Q9Y5F7 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGC4Q9Y5F7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHGC4Q9Y5F7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGC4Q9Y5F7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGC4Q9Y5F7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGC4Q9Y5F7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PCDHGC4Q9Y5F7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGC4Q9Y5F7 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGC4Q9Y5F7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGC4Q9Y5F7 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGC4Q9Y5F7 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGC4Q9Y5F7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGC4Q9Y5F7 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.72■□□□□ 0.43
PCDHGC4Q9Y5F7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHGC4Q9Y5F7 LINC00896-202ENST00000609602 2128 ntBASIC17.72■□□□□ 0.43
PCDHGC4Q9Y5F7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
PCDHGC4Q9Y5F7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGC4Q9Y5F7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGC4Q9Y5F7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGC4Q9Y5F7 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGC4Q9Y5F7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGC4Q9Y5F7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGC4Q9Y5F7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGC4Q9Y5F7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGC4Q9Y5F7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGC4Q9Y5F7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGC4Q9Y5F7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGC4Q9Y5F7 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PCDHGC4Q9Y5F7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGC4Q9Y5F7 AC106795.1-205ENST00000512851 1056 ntBASIC17.72■□□□□ 0.43
PCDHGC4Q9Y5F7 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.72■□□□□ 0.43
PCDHGC4Q9Y5F7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGC4Q9Y5F7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHGC4Q9Y5F7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGC4Q9Y5F7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PCDHGC4Q9Y5F7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PCDHGC4Q9Y5F7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PCDHGC4Q9Y5F7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGC4Q9Y5F7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGC4Q9Y5F7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGC4Q9Y5F7 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGC4Q9Y5F7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PCDHGC4Q9Y5F7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PCDHGC4Q9Y5F7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms