Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
BLOC1S4Q9NUP1 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
BLOC1S4Q9NUP1 AC009336.1-201ENST00000608941 1553 ntBASIC19.52■□□□□ 0.71
BLOC1S4Q9NUP1 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
BLOC1S4Q9NUP1 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.52■□□□□ 0.71
BLOC1S4Q9NUP1 AC116353.5-201ENST00000638148 1699 ntBASIC19.52■□□□□ 0.71
BLOC1S4Q9NUP1 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
BLOC1S4Q9NUP1 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
BLOC1S4Q9NUP1 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
BLOC1S4Q9NUP1 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
BLOC1S4Q9NUP1 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.51■□□□□ 0.71
BLOC1S4Q9NUP1 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BLOC1S4Q9NUP1 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BLOC1S4Q9NUP1 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
BLOC1S4Q9NUP1 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
BLOC1S4Q9NUP1 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BLOC1S4Q9NUP1 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BLOC1S4Q9NUP1 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
BLOC1S4Q9NUP1 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BLOC1S4Q9NUP1 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
BLOC1S4Q9NUP1 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
BLOC1S4Q9NUP1 TSPY19P-201ENST00000418461 509 ntBASIC19.51■□□□□ 0.71
BLOC1S4Q9NUP1 TSPY18P-201ENST00000441642 509 ntBASIC19.51■□□□□ 0.71
BLOC1S4Q9NUP1 ABCD1P5-201ENST00000445663 754 ntBASIC19.51■□□□□ 0.71
BLOC1S4Q9NUP1 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.51■□□□□ 0.71
BLOC1S4Q9NUP1 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.51■□□□□ 0.71
BLOC1S4Q9NUP1 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
BLOC1S4Q9NUP1 AL591684.3-201ENST00000605187 298 ntBASIC19.51■□□□□ 0.71
BLOC1S4Q9NUP1 AC012313.10-201ENST00000623509 926 ntBASIC19.51■□□□□ 0.71
BLOC1S4Q9NUP1 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BLOC1S4Q9NUP1 AP001094.4-201ENST00000579008 2176 ntBASIC19.51■□□□□ 0.71
BLOC1S4Q9NUP1 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
BLOC1S4Q9NUP1 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
BLOC1S4Q9NUP1 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
BLOC1S4Q9NUP1 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
BLOC1S4Q9NUP1 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BLOC1S4Q9NUP1 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BLOC1S4Q9NUP1 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BLOC1S4Q9NUP1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BLOC1S4Q9NUP1 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
BLOC1S4Q9NUP1 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BLOC1S4Q9NUP1 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
BLOC1S4Q9NUP1 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.51■□□□□ 0.71
BLOC1S4Q9NUP1 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
BLOC1S4Q9NUP1 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
BLOC1S4Q9NUP1 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
BLOC1S4Q9NUP1 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
BLOC1S4Q9NUP1 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
BLOC1S4Q9NUP1 AC080080.1-201ENST00000625121 2420 ntBASIC19.5■□□□□ 0.71
BLOC1S4Q9NUP1 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.5■□□□□ 0.71
BLOC1S4Q9NUP1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
BLOC1S4Q9NUP1 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BLOC1S4Q9NUP1 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.5■□□□□ 0.71
BLOC1S4Q9NUP1 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.5■□□□□ 0.71
BLOC1S4Q9NUP1 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.5■□□□□ 0.71
BLOC1S4Q9NUP1 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.5■□□□□ 0.71
BLOC1S4Q9NUP1 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
BLOC1S4Q9NUP1 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.5■□□□□ 0.71
BLOC1S4Q9NUP1 AP001269.4-201ENST00000609611 512 ntBASIC19.5■□□□□ 0.71
BLOC1S4Q9NUP1 AL732292.2-201ENST00000609649 430 ntBASIC19.5■□□□□ 0.71
BLOC1S4Q9NUP1 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.5■□□□□ 0.71
BLOC1S4Q9NUP1 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.5■□□□□ 0.71
BLOC1S4Q9NUP1 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.5■□□□□ 0.71
BLOC1S4Q9NUP1 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BLOC1S4Q9NUP1 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BLOC1S4Q9NUP1 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BLOC1S4Q9NUP1 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.5■□□□□ 0.71
BLOC1S4Q9NUP1 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BLOC1S4Q9NUP1 AC148477.5-201ENST00000625164 1645 ntBASIC19.5■□□□□ 0.71
BLOC1S4Q9NUP1 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
BLOC1S4Q9NUP1 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BLOC1S4Q9NUP1 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
BLOC1S4Q9NUP1 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.5■□□□□ 0.71
BLOC1S4Q9NUP1 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BLOC1S4Q9NUP1 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BLOC1S4Q9NUP1 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.49■□□□□ 0.71
BLOC1S4Q9NUP1 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BLOC1S4Q9NUP1 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BLOC1S4Q9NUP1 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BLOC1S4Q9NUP1 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BLOC1S4Q9NUP1 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
BLOC1S4Q9NUP1 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BLOC1S4Q9NUP1 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
BLOC1S4Q9NUP1 AC132008.2-207ENST00000454517 770 ntBASIC19.49■□□□□ 0.71
BLOC1S4Q9NUP1 KRT18P31-201ENST00000506277 1292 ntBASIC19.49■□□□□ 0.71
BLOC1S4Q9NUP1 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.49■□□□□ 0.71
BLOC1S4Q9NUP1 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BLOC1S4Q9NUP1 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.49■□□□□ 0.71
BLOC1S4Q9NUP1 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.49■□□□□ 0.71
BLOC1S4Q9NUP1 CLEC4GP1-201ENST00000596555 870 ntBASIC19.49■□□□□ 0.71
BLOC1S4Q9NUP1 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
BLOC1S4Q9NUP1 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BLOC1S4Q9NUP1 LTB4R2-202ENST00000528054 3092 ntBASIC19.49■□□□□ 0.71
BLOC1S4Q9NUP1 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BLOC1S4Q9NUP1 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BLOC1S4Q9NUP1 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.49■□□□□ 0.71
BLOC1S4Q9NUP1 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.49■□□□□ 0.71
BLOC1S4Q9NUP1 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
BLOC1S4Q9NUP1 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
BLOC1S4Q9NUP1 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms