Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTFDC1Q9BY42 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTFDC1Q9BY42 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.2■□□□□ 0.98
RTFDC1Q9BY42 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
RTFDC1Q9BY42 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTFDC1Q9BY42 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTFDC1Q9BY42 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTFDC1Q9BY42 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTFDC1Q9BY42 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RTFDC1Q9BY42 CD99-202ENST00000381180 530 ntTSL 2 BASIC21.2■□□□□ 0.98
RTFDC1Q9BY42 IGHV3OR16-6-201ENST00000568775 360 ntBASIC21.2■□□□□ 0.98
RTFDC1Q9BY42 AC005498.2-205ENST00000593218 784 ntBASIC21.2■□□□□ 0.98
RTFDC1Q9BY42 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
RTFDC1Q9BY42 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC21.2■□□□□ 0.98
RTFDC1Q9BY42 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RTFDC1Q9BY42 REXO1L9P-201ENST00000604264 2108 ntBASIC21.2■□□□□ 0.98
RTFDC1Q9BY42 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RTFDC1Q9BY42 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
RTFDC1Q9BY42 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.2■□□□□ 0.98
RTFDC1Q9BY42 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTFDC1Q9BY42 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTFDC1Q9BY42 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.2■□□□□ 0.98
RTFDC1Q9BY42 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RTFDC1Q9BY42 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTFDC1Q9BY42 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.19■□□□□ 0.98
RTFDC1Q9BY42 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTFDC1Q9BY42 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.19■□□□□ 0.98
RTFDC1Q9BY42 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.19■□□□□ 0.98
RTFDC1Q9BY42 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.19■□□□□ 0.98
RTFDC1Q9BY42 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTFDC1Q9BY42 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
RTFDC1Q9BY42 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
RTFDC1Q9BY42 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC21.19■□□□□ 0.98
RTFDC1Q9BY42 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RTFDC1Q9BY42 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC21.19■□□□□ 0.98
RTFDC1Q9BY42 AC093520.2-201ENST00000561830 333 ntBASIC21.19■□□□□ 0.98
RTFDC1Q9BY42 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
RTFDC1Q9BY42 LINC00628-201ENST00000628516 1289 ntBASIC21.19■□□□□ 0.98
RTFDC1Q9BY42 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.19■□□□□ 0.98
RTFDC1Q9BY42 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTFDC1Q9BY42 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RTFDC1Q9BY42 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
RTFDC1Q9BY42 AC087289.5-201ENST00000586076 3175 ntBASIC21.19■□□□□ 0.98
RTFDC1Q9BY42 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTFDC1Q9BY42 AC120498.9-201ENST00000339021 3867 ntBASIC21.19■□□□□ 0.98
RTFDC1Q9BY42 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RTFDC1Q9BY42 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RTFDC1Q9BY42 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
RTFDC1Q9BY42 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTFDC1Q9BY42 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.18■□□□□ 0.98
RTFDC1Q9BY42 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTFDC1Q9BY42 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.18■□□□□ 0.98
RTFDC1Q9BY42 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC21.18■□□□□ 0.98
RTFDC1Q9BY42 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC21.18■□□□□ 0.98
RTFDC1Q9BY42 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTFDC1Q9BY42 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RTFDC1Q9BY42 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RTFDC1Q9BY42 FALEC-201ENST00000416894 566 ntTSL 3 BASIC21.18■□□□□ 0.98
RTFDC1Q9BY42 AC112191.1-201ENST00000523689 701 ntBASIC21.18■□□□□ 0.98
RTFDC1Q9BY42 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RTFDC1Q9BY42 INO80C-206ENST00000586489 594 ntTSL 3 BASIC21.18■□□□□ 0.98
RTFDC1Q9BY42 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RTFDC1Q9BY42 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
RTFDC1Q9BY42 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC21.18■□□□□ 0.98
RTFDC1Q9BY42 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTFDC1Q9BY42 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.18■□□□□ 0.98
RTFDC1Q9BY42 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RTFDC1Q9BY42 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTFDC1Q9BY42 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RTFDC1Q9BY42 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC21.18■□□□□ 0.98
RTFDC1Q9BY42 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RTFDC1Q9BY42 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.18■□□□□ 0.98
RTFDC1Q9BY42 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RTFDC1Q9BY42 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
RTFDC1Q9BY42 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RTFDC1Q9BY42 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.18■□□□□ 0.98
RTFDC1Q9BY42 AC004408.2-201ENST00000623613 2777 ntBASIC21.18■□□□□ 0.98
RTFDC1Q9BY42 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTFDC1Q9BY42 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTFDC1Q9BY42 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.18■□□□□ 0.98
RTFDC1Q9BY42 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.18■□□□□ 0.98
RTFDC1Q9BY42 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
RTFDC1Q9BY42 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.17■□□□□ 0.98
RTFDC1Q9BY42 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
RTFDC1Q9BY42 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTFDC1Q9BY42 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTFDC1Q9BY42 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RTFDC1Q9BY42 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC21.17■□□□□ 0.98
RTFDC1Q9BY42 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
RTFDC1Q9BY42 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC21.17■□□□□ 0.98
RTFDC1Q9BY42 RPL28-209ENST00000560055 670 ntTSL 3 BASIC21.17■□□□□ 0.98
RTFDC1Q9BY42 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC21.17■□□□□ 0.98
RTFDC1Q9BY42 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC21.17■□□□□ 0.98
RTFDC1Q9BY42 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC21.17■□□□□ 0.98
RTFDC1Q9BY42 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC21.17■□□□□ 0.98
RTFDC1Q9BY42 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTFDC1Q9BY42 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
RTFDC1Q9BY42 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTFDC1Q9BY42 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RTFDC1Q9BY42 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms