Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NR1H4Q96RI1 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
NR1H4Q96RI1 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
NR1H4Q96RI1 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.57■□□□□ 0.24
NR1H4Q96RI1 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NR1H4Q96RI1 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NR1H4Q96RI1 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.57■□□□□ 0.24
NR1H4Q96RI1 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
NR1H4Q96RI1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
NR1H4Q96RI1 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NR1H4Q96RI1 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
NR1H4Q96RI1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NR1H4Q96RI1 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.57■□□□□ 0.24
NR1H4Q96RI1 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NR1H4Q96RI1 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
NR1H4Q96RI1 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NR1H4Q96RI1 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NR1H4Q96RI1 SLC29A4P1-201ENST00000398760 971 ntBASIC16.57■□□□□ 0.24
NR1H4Q96RI1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.57■□□□□ 0.24
NR1H4Q96RI1 RPS2P52-201ENST00000469610 820 ntBASIC16.57■□□□□ 0.24
NR1H4Q96RI1 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
NR1H4Q96RI1 RAP2CP1-201ENST00000605103 478 ntBASIC16.57■□□□□ 0.24
NR1H4Q96RI1 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
NR1H4Q96RI1 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
NR1H4Q96RI1 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
NR1H4Q96RI1 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.57■□□□□ 0.24
NR1H4Q96RI1 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.57■□□□□ 0.24
NR1H4Q96RI1 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
NR1H4Q96RI1 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NR1H4Q96RI1 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NR1H4Q96RI1 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
NR1H4Q96RI1 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H4Q96RI1 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
NR1H4Q96RI1 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
NR1H4Q96RI1 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
NR1H4Q96RI1 AC092171.3-201ENST00000610122 2651 ntBASIC16.56■□□□□ 0.24
NR1H4Q96RI1 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.56■□□□□ 0.24
NR1H4Q96RI1 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H4Q96RI1 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H4Q96RI1 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H4Q96RI1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H4Q96RI1 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.56■□□□□ 0.24
NR1H4Q96RI1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.56■□□□□ 0.24
NR1H4Q96RI1 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.56■□□□□ 0.24
NR1H4Q96RI1 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
NR1H4Q96RI1 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.56■□□□□ 0.24
NR1H4Q96RI1 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.56■□□□□ 0.24
NR1H4Q96RI1 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H4Q96RI1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.56■□□□□ 0.24
NR1H4Q96RI1 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.56■□□□□ 0.24
NR1H4Q96RI1 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.56■□□□□ 0.24
NR1H4Q96RI1 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.56■□□□□ 0.24
NR1H4Q96RI1 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
NR1H4Q96RI1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H4Q96RI1 AC005829.2-201ENST00000571422 1056 ntBASIC16.56■□□□□ 0.24
NR1H4Q96RI1 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.56■□□□□ 0.24
NR1H4Q96RI1 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H4Q96RI1 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H4Q96RI1 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
NR1H4Q96RI1 C8orf49-201ENST00000525043 1968 ntBASIC16.56■□□□□ 0.24
NR1H4Q96RI1 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
NR1H4Q96RI1 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H4Q96RI1 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H4Q96RI1 RNF216P1-203ENST00000404404 2427 ntBASIC16.56■□□□□ 0.24
NR1H4Q96RI1 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H4Q96RI1 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H4Q96RI1 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H4Q96RI1 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H4Q96RI1 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NR1H4Q96RI1 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NR1H4Q96RI1 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
NR1H4Q96RI1 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
NR1H4Q96RI1 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.55■□□□□ 0.24
NR1H4Q96RI1 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NR1H4Q96RI1 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
NR1H4Q96RI1 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NR1H4Q96RI1 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NR1H4Q96RI1 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.55■□□□□ 0.24
NR1H4Q96RI1 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
NR1H4Q96RI1 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
NR1H4Q96RI1 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
NR1H4Q96RI1 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NR1H4Q96RI1 POU5F1P3-201ENST00000428824 1078 ntBASIC16.55■□□□□ 0.24
NR1H4Q96RI1 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
NR1H4Q96RI1 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NR1H4Q96RI1 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.55■□□□□ 0.24
NR1H4Q96RI1 DUTP2-201ENST00000519164 463 ntBASIC16.55■□□□□ 0.24
NR1H4Q96RI1 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.55■□□□□ 0.24
NR1H4Q96RI1 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.55■□□□□ 0.24
NR1H4Q96RI1 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NR1H4Q96RI1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.55■□□□□ 0.24
NR1H4Q96RI1 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.55■□□□□ 0.24
NR1H4Q96RI1 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
NR1H4Q96RI1 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.55■□□□□ 0.24
NR1H4Q96RI1 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NR1H4Q96RI1 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NR1H4Q96RI1 DBET-201ENST00000630918 3363 ntBASIC16.55■□□□□ 0.24
NR1H4Q96RI1 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NR1H4Q96RI1 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NR1H4Q96RI1 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms