Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PTP4A1Q93096 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTP4A1Q93096 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTP4A1Q93096 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PTP4A1Q93096 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTP4A1Q93096 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PTP4A1Q93096 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTP4A1Q93096 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PTP4A1Q93096 RNF152P1-201ENST00000397754 604 ntBASIC15.81■□□□□ 0.12
PTP4A1Q93096 RCN1P1-201ENST00000400413 996 ntBASIC15.81■□□□□ 0.12
PTP4A1Q93096 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTP4A1Q93096 AK4P3-201ENST00000418260 669 ntBASIC15.81■□□□□ 0.12
PTP4A1Q93096 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PTP4A1Q93096 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.81■□□□□ 0.12
PTP4A1Q93096 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.81■□□□□ 0.12
PTP4A1Q93096 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.81■□□□□ 0.12
PTP4A1Q93096 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PTP4A1Q93096 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.81■□□□□ 0.12
PTP4A1Q93096 AL441883.1-201ENST00000566170 1045 ntBASIC15.81■□□□□ 0.12
PTP4A1Q93096 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PTP4A1Q93096 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.81■□□□□ 0.12
PTP4A1Q93096 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.81■□□□□ 0.12
PTP4A1Q93096 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PTP4A1Q93096 AL136038.4-201ENST00000603606 1261 ntBASIC15.81■□□□□ 0.12
PTP4A1Q93096 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.81■□□□□ 0.12
PTP4A1Q93096 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PTP4A1Q93096 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.81■□□□□ 0.12
PTP4A1Q93096 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTP4A1Q93096 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTP4A1Q93096 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTP4A1Q93096 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTP4A1Q93096 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.81■□□□□ 0.12
PTP4A1Q93096 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.8■□□□□ 0.12
PTP4A1Q93096 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PTP4A1Q93096 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTP4A1Q93096 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTP4A1Q93096 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTP4A1Q93096 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.8■□□□□ 0.12
PTP4A1Q93096 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PTP4A1Q93096 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTP4A1Q93096 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
PTP4A1Q93096 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
PTP4A1Q93096 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTP4A1Q93096 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTP4A1Q93096 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.8■□□□□ 0.12
PTP4A1Q93096 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTP4A1Q93096 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTP4A1Q93096 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTP4A1Q93096 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTP4A1Q93096 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTP4A1Q93096 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTP4A1Q93096 CICP6-201ENST00000457191 2729 ntBASIC15.8■□□□□ 0.12
PTP4A1Q93096 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
PTP4A1Q93096 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.8■□□□□ 0.12
PTP4A1Q93096 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTP4A1Q93096 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
PTP4A1Q93096 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PTP4A1Q93096 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC15.8■□□□□ 0.12
PTP4A1Q93096 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PTP4A1Q93096 HLA-F-220ENST00000434407 884 ntBASIC15.8■□□□□ 0.12
PTP4A1Q93096 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTP4A1Q93096 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.8■□□□□ 0.12
PTP4A1Q93096 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTP4A1Q93096 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
PTP4A1Q93096 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.8■□□□□ 0.12
PTP4A1Q93096 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTP4A1Q93096 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
PTP4A1Q93096 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTP4A1Q93096 AC060834.1-201ENST00000443027 2032 ntBASIC15.8■□□□□ 0.12
PTP4A1Q93096 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PTP4A1Q93096 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.8■□□□□ 0.12
PTP4A1Q93096 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTP4A1Q93096 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.8■□□□□ 0.12
PTP4A1Q93096 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTP4A1Q93096 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTP4A1Q93096 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTP4A1Q93096 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.8■□□□□ 0.12
PTP4A1Q93096 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
PTP4A1Q93096 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A1Q93096 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A1Q93096 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.79■□□□□ 0.12
PTP4A1Q93096 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.79■□□□□ 0.12
PTP4A1Q93096 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A1Q93096 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A1Q93096 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A1Q93096 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A1Q93096 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
PTP4A1Q93096 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A1Q93096 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
PTP4A1Q93096 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.79■□□□□ 0.12
PTP4A1Q93096 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A1Q93096 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A1Q93096 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A1Q93096 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A1Q93096 TSPY12P-201ENST00000421279 868 ntBASIC15.79■□□□□ 0.12
PTP4A1Q93096 KRT18P48-201ENST00000434763 852 ntBASIC15.79■□□□□ 0.12
PTP4A1Q93096 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.79■□□□□ 0.12
PTP4A1Q93096 AC104076.2-201ENST00000448912 469 ntBASIC15.79■□□□□ 0.12
PTP4A1Q93096 HOMER2P1-201ENST00000455653 964 ntBASIC15.79■□□□□ 0.12
PTP4A1Q93096 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms