Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SMIM4Q8WVI0 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.06■□□□□ 0
SMIM4Q8WVI0 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
SMIM4Q8WVI0 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
SMIM4Q8WVI0 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SMIM4Q8WVI0 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SMIM4Q8WVI0 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.06■□□□□ 0
SMIM4Q8WVI0 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.06■□□□□ 0
SMIM4Q8WVI0 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SMIM4Q8WVI0 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.06■□□□□ 0
SMIM4Q8WVI0 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.05■□□□□ 0
SMIM4Q8WVI0 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SMIM4Q8WVI0 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
SMIM4Q8WVI0 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.05■□□□□ 0
SMIM4Q8WVI0 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.05■□□□□ 0
SMIM4Q8WVI0 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ 0
SMIM4Q8WVI0 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC15.05■□□□□ -0
SMIM4Q8WVI0 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.05■□□□□ -0
SMIM4Q8WVI0 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
SMIM4Q8WVI0 PPP1R14BP3-201ENST00000509033 445 ntBASIC15.05■□□□□ -0
SMIM4Q8WVI0 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC15.05■□□□□ -0
SMIM4Q8WVI0 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC15.05■□□□□ -0
SMIM4Q8WVI0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC15.05■□□□□ -0
SMIM4Q8WVI0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC15.05■□□□□ -0
SMIM4Q8WVI0 AC110285.5-201ENST00000611501 352 ntBASIC15.05■□□□□ -0
SMIM4Q8WVI0 AC133041.1-202ENST00000642053 222 ntBASIC15.05■□□□□ -0
SMIM4Q8WVI0 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
SMIM4Q8WVI0 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
SMIM4Q8WVI0 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.05■□□□□ -0
SMIM4Q8WVI0 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SMIM4Q8WVI0 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SMIM4Q8WVI0 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.05■□□□□ -0
SMIM4Q8WVI0 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SMIM4Q8WVI0 AC105917.1-201ENST00000506637 2539 ntBASIC15.05■□□□□ -0
SMIM4Q8WVI0 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
SMIM4Q8WVI0 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
SMIM4Q8WVI0 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SMIM4Q8WVI0 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SMIM4Q8WVI0 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SMIM4Q8WVI0 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
SMIM4Q8WVI0 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
SMIM4Q8WVI0 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SMIM4Q8WVI0 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SMIM4Q8WVI0 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SMIM4Q8WVI0 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
SMIM4Q8WVI0 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SMIM4Q8WVI0 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.04■□□□□ -0
SMIM4Q8WVI0 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.04■□□□□ -0
SMIM4Q8WVI0 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SMIM4Q8WVI0 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SMIM4Q8WVI0 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
SMIM4Q8WVI0 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.04■□□□□ -0
SMIM4Q8WVI0 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.04■□□□□ -0
SMIM4Q8WVI0 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SMIM4Q8WVI0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SMIM4Q8WVI0 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SMIM4Q8WVI0 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.04■□□□□ -0
SMIM4Q8WVI0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SMIM4Q8WVI0 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SMIM4Q8WVI0 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.04■□□□□ -0
SMIM4Q8WVI0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SMIM4Q8WVI0 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SMIM4Q8WVI0 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
SMIM4Q8WVI0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.04■□□□□ -0
SMIM4Q8WVI0 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.04■□□□□ -0
SMIM4Q8WVI0 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SMIM4Q8WVI0 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SMIM4Q8WVI0 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC15.04■□□□□ -0
SMIM4Q8WVI0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SMIM4Q8WVI0 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.04■□□□□ -0
SMIM4Q8WVI0 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SMIM4Q8WVI0 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC15.04■□□□□ -0
SMIM4Q8WVI0 AC005104.2-201ENST00000427818 678 ntBASIC15.04■□□□□ -0
SMIM4Q8WVI0 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.04■□□□□ -0
SMIM4Q8WVI0 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.04■□□□□ -0
SMIM4Q8WVI0 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.04■□□□□ -0
SMIM4Q8WVI0 AP003097.1-201ENST00000530657 1135 ntBASIC15.04■□□□□ -0
SMIM4Q8WVI0 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC15.04■□□□□ -0
SMIM4Q8WVI0 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC15.04■□□□□ -0
SMIM4Q8WVI0 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SMIM4Q8WVI0 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SMIM4Q8WVI0 AC132872.4-202ENST00000622924 2756 ntBASIC15.04■□□□□ -0
SMIM4Q8WVI0 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SMIM4Q8WVI0 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SMIM4Q8WVI0 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.04■□□□□ -0
SMIM4Q8WVI0 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
SMIM4Q8WVI0 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SMIM4Q8WVI0 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.04■□□□□ -0
SMIM4Q8WVI0 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SMIM4Q8WVI0 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SMIM4Q8WVI0 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SMIM4Q8WVI0 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.04■□□□□ -0
SMIM4Q8WVI0 AC092053.1-201ENST00000605787 1936 ntBASIC15.04■□□□□ -0
SMIM4Q8WVI0 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SMIM4Q8WVI0 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMIM4Q8WVI0 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.03■□□□□ -0
SMIM4Q8WVI0 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMIM4Q8WVI0 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SMIM4Q8WVI0 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SMIM4Q8WVI0 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms