Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC10.92□□□□□ -0.66
SVIPQ8NHG7 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
SVIPQ8NHG7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC10.92□□□□□ -0.66
SVIPQ8NHG7 AC091951.1-201ENST00000512854 2465 ntBASIC10.92□□□□□ -0.66
SVIPQ8NHG7 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SVIPQ8NHG7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SVIPQ8NHG7 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SVIPQ8NHG7 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC10.92□□□□□ -0.66
SVIPQ8NHG7 POM121L7P-201ENST00000329949 2404 ntBASIC10.92□□□□□ -0.66
SVIPQ8NHG7 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 APOBEC3C-201ENST00000361441 2818 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 PDE6B-201ENST00000255622 3280 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 AL161772.1-201ENST00000610494 4412 ntBASIC10.91□□□□□ -0.66
SVIPQ8NHG7 IRF5-213ENST00000489702 2988 ntTSL 5 BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 TWNK-202ENST00000370228 3175 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 AC139099.1-202ENST00000574098 2409 ntBASIC10.91□□□□□ -0.66
SVIPQ8NHG7 CELP-203ENST00000624767 2414 ntTSL 5 BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 ABALON-201ENST00000629058 1903 ntBASIC10.91□□□□□ -0.66
SVIPQ8NHG7 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 PLA2G15-201ENST00000219345 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SVIPQ8NHG7 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SVIPQ8NHG7 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
SVIPQ8NHG7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC10.9□□□□□ -0.66
SVIPQ8NHG7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SVIPQ8NHG7 PAK1-215ENST00000530617 3001 ntTSL 2 BASIC10.9□□□□□ -0.66
SVIPQ8NHG7 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SVIPQ8NHG7 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SVIPQ8NHG7 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SVIPQ8NHG7 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
SVIPQ8NHG7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SVIPQ8NHG7 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
SVIPQ8NHG7 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC10.9□□□□□ -0.66
SVIPQ8NHG7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SVIPQ8NHG7 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC10.9□□□□□ -0.66
SVIPQ8NHG7 USP47-202ENST00000339865 7775 ntTSL 2 BASIC10.9□□□□□ -0.66
SVIPQ8NHG7 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SVIPQ8NHG7 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SVIPQ8NHG7 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SVIPQ8NHG7 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC10.9□□□□□ -0.66
SVIPQ8NHG7 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
SVIPQ8NHG7 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
SVIPQ8NHG7 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SVIPQ8NHG7 LINC00365-201ENST00000413591 2618 ntTSL 3 BASIC10.9□□□□□ -0.66
SVIPQ8NHG7 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
SVIPQ8NHG7 GUCY1A3-207ENST00000511108 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SVIPQ8NHG7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
SVIPQ8NHG7 SMAP1-203ENST00000370455 3333 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SVIPQ8NHG7 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC10.9□□□□□ -0.66
SVIPQ8NHG7 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
SVIPQ8NHG7 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SVIPQ8NHG7 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SVIPQ8NHG7 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SVIPQ8NHG7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC10.9□□□□□ -0.67
SVIPQ8NHG7 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SVIPQ8NHG7 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
SVIPQ8NHG7 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SVIPQ8NHG7 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.67
SVIPQ8NHG7 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SVIPQ8NHG7 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SVIPQ8NHG7 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 AC009078.3-201ENST00000624205 4084 ntBASIC10.89□□□□□ -0.67
SVIPQ8NHG7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 IL17REL-202ENST00000389983 3668 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
SVIPQ8NHG7 PRAMEF27-201ENST00000436041 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms