Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPEB3Q8NE35 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPEB3Q8NE35 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.41■□□□□ 0.06
CPEB3Q8NE35 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPEB3Q8NE35 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CPEB3Q8NE35 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.41■□□□□ 0.06
CPEB3Q8NE35 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPEB3Q8NE35 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CPEB3Q8NE35 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
CPEB3Q8NE35 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CPEB3Q8NE35 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPEB3Q8NE35 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPEB3Q8NE35 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
CPEB3Q8NE35 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPEB3Q8NE35 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPEB3Q8NE35 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.41■□□□□ 0.06
CPEB3Q8NE35 MINOS1P3-201ENST00000457048 203 ntBASIC15.41■□□□□ 0.06
CPEB3Q8NE35 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.41■□□□□ 0.06
CPEB3Q8NE35 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.41■□□□□ 0.06
CPEB3Q8NE35 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.41■□□□□ 0.06
CPEB3Q8NE35 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CPEB3Q8NE35 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.41■□□□□ 0.06
CPEB3Q8NE35 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CPEB3Q8NE35 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.41■□□□□ 0.06
CPEB3Q8NE35 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CPEB3Q8NE35 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.41■□□□□ 0.06
CPEB3Q8NE35 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CPEB3Q8NE35 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPEB3Q8NE35 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPEB3Q8NE35 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CPEB3Q8NE35 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CPEB3Q8NE35 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CPEB3Q8NE35 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CPEB3Q8NE35 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPEB3Q8NE35 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CPEB3Q8NE35 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPEB3Q8NE35 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CPEB3Q8NE35 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPEB3Q8NE35 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPEB3Q8NE35 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPEB3Q8NE35 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPEB3Q8NE35 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.4■□□□□ 0.06
CPEB3Q8NE35 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.4■□□□□ 0.06
CPEB3Q8NE35 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.4■□□□□ 0.06
CPEB3Q8NE35 AC104819.1-201ENST00000504587 486 ntBASIC15.4■□□□□ 0.06
CPEB3Q8NE35 AC009533.2-201ENST00000543664 586 ntBASIC15.4■□□□□ 0.06
CPEB3Q8NE35 AC012615.1-201ENST00000565797 1299 ntBASIC15.4■□□□□ 0.06
CPEB3Q8NE35 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.4■□□□□ 0.06
CPEB3Q8NE35 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.4■□□□□ 0.06
CPEB3Q8NE35 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CPEB3Q8NE35 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CPEB3Q8NE35 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPEB3Q8NE35 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPEB3Q8NE35 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CPEB3Q8NE35 AC133963.1-201ENST00000504166 1679 ntBASIC15.4■□□□□ 0.06
CPEB3Q8NE35 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPEB3Q8NE35 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPEB3Q8NE35 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPEB3Q8NE35 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
CPEB3Q8NE35 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPEB3Q8NE35 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CPEB3Q8NE35 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.06
CPEB3Q8NE35 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.06
CPEB3Q8NE35 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 HCG4P8-203ENST00000443049 980 ntBASIC15.39■□□□□ 0.05
CPEB3Q8NE35 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 BNIP3P18-201ENST00000593976 575 ntBASIC15.39■□□□□ 0.05
CPEB3Q8NE35 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.39■□□□□ 0.05
CPEB3Q8NE35 LINC01451-201ENST00000623792 534 ntBASIC15.39■□□□□ 0.05
CPEB3Q8NE35 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms