Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SYNPOQ8N3V7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.82■□□□□ 0.44
SYNPOQ8N3V7 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SYNPOQ8N3V7 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SYNPOQ8N3V7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SYNPOQ8N3V7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.82■□□□□ 0.44
SYNPOQ8N3V7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.82■□□□□ 0.44
SYNPOQ8N3V7 AP002472.1-201ENST00000577490 586 ntBASIC17.82■□□□□ 0.44
SYNPOQ8N3V7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.82■□□□□ 0.44
SYNPOQ8N3V7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.82■□□□□ 0.44
SYNPOQ8N3V7 AL513190.1-201ENST00000621254 727 ntBASIC17.82■□□□□ 0.44
SYNPOQ8N3V7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SYNPOQ8N3V7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SYNPOQ8N3V7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SYNPOQ8N3V7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SYNPOQ8N3V7 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SYNPOQ8N3V7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.82■□□□□ 0.44
SYNPOQ8N3V7 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.82■□□□□ 0.44
SYNPOQ8N3V7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SYNPOQ8N3V7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SYNPOQ8N3V7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SYNPOQ8N3V7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.82■□□□□ 0.44
SYNPOQ8N3V7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SYNPOQ8N3V7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.82■□□□□ 0.44
SYNPOQ8N3V7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SYNPOQ8N3V7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SYNPOQ8N3V7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYNPOQ8N3V7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SYNPOQ8N3V7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYNPOQ8N3V7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.81■□□□□ 0.44
SYNPOQ8N3V7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SYNPOQ8N3V7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYNPOQ8N3V7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYNPOQ8N3V7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYNPOQ8N3V7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.81■□□□□ 0.44
SYNPOQ8N3V7 MRPL20P1-201ENST00000400819 433 ntBASIC17.81■□□□□ 0.44
SYNPOQ8N3V7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.81■□□□□ 0.44
SYNPOQ8N3V7 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYNPOQ8N3V7 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.81■□□□□ 0.44
SYNPOQ8N3V7 ACTG1P14-201ENST00000446382 1122 ntBASIC17.81■□□□□ 0.44
SYNPOQ8N3V7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.81■□□□□ 0.44
SYNPOQ8N3V7 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.81■□□□□ 0.44
SYNPOQ8N3V7 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.81■□□□□ 0.44
SYNPOQ8N3V7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.81■□□□□ 0.44
SYNPOQ8N3V7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.81■□□□□ 0.44
SYNPOQ8N3V7 GGTLC5P-201ENST00000617623 998 ntBASIC17.81■□□□□ 0.44
SYNPOQ8N3V7 AC004790.2-201ENST00000623588 572 ntBASIC17.81■□□□□ 0.44
SYNPOQ8N3V7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.81■□□□□ 0.44
SYNPOQ8N3V7 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.81■□□□□ 0.44
SYNPOQ8N3V7 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYNPOQ8N3V7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
SYNPOQ8N3V7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.81■□□□□ 0.44
SYNPOQ8N3V7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.81■□□□□ 0.44
SYNPOQ8N3V7 SIRPAP1-201ENST00000448467 1770 ntBASIC17.81■□□□□ 0.44
SYNPOQ8N3V7 GPR89P-201ENST00000407924 1495 ntBASIC17.81■□□□□ 0.44
SYNPOQ8N3V7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SYNPOQ8N3V7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 CEND1P1-201ENST00000451006 455 ntBASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 AC096734.2-201ENST00000562054 433 ntBASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 AC018845.2-201ENST00000568326 409 ntBASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.8■□□□□ 0.44
SYNPOQ8N3V7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.79■□□□□ 0.44
SYNPOQ8N3V7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYNPOQ8N3V7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
SYNPOQ8N3V7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms