Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
UBE3BQ7Z3V4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
UBE3BQ7Z3V4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
UBE3BQ7Z3V4 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
UBE3BQ7Z3V4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC21.87■■□□□ 1.09
UBE3BQ7Z3V4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC21.87■■□□□ 1.09
UBE3BQ7Z3V4 AL139424.1-201ENST00000607572 797 ntBASIC21.87■■□□□ 1.09
UBE3BQ7Z3V4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UBE3BQ7Z3V4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UBE3BQ7Z3V4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UBE3BQ7Z3V4 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UBE3BQ7Z3V4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
UBE3BQ7Z3V4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
UBE3BQ7Z3V4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
UBE3BQ7Z3V4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
UBE3BQ7Z3V4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
UBE3BQ7Z3V4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC21.87■■□□□ 1.09
UBE3BQ7Z3V4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
UBE3BQ7Z3V4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
UBE3BQ7Z3V4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
UBE3BQ7Z3V4 PMS2P7-201ENST00000506558 1336 ntBASIC21.86■■□□□ 1.09
UBE3BQ7Z3V4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
UBE3BQ7Z3V4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
UBE3BQ7Z3V4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
UBE3BQ7Z3V4 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
UBE3BQ7Z3V4 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
UBE3BQ7Z3V4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
UBE3BQ7Z3V4 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
UBE3BQ7Z3V4 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
UBE3BQ7Z3V4 CAND2-206ENST00000626378 333 ntTSL 5 BASIC21.86■■□□□ 1.09
UBE3BQ7Z3V4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC21.86■■□□□ 1.09
UBE3BQ7Z3V4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
UBE3BQ7Z3V4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
UBE3BQ7Z3V4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
UBE3BQ7Z3V4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
UBE3BQ7Z3V4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
UBE3BQ7Z3V4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
UBE3BQ7Z3V4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC21.85■■□□□ 1.09
UBE3BQ7Z3V4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
UBE3BQ7Z3V4 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC21.85■■□□□ 1.09
UBE3BQ7Z3V4 AC007967.2-201ENST00000432613 625 ntBASIC21.85■■□□□ 1.09
UBE3BQ7Z3V4 PGAM5P1-201ENST00000518923 814 ntBASIC21.85■■□□□ 1.09
UBE3BQ7Z3V4 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
UBE3BQ7Z3V4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
UBE3BQ7Z3V4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC21.85■■□□□ 1.09
UBE3BQ7Z3V4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
UBE3BQ7Z3V4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC21.85■■□□□ 1.09
UBE3BQ7Z3V4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
UBE3BQ7Z3V4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
UBE3BQ7Z3V4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
UBE3BQ7Z3V4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
UBE3BQ7Z3V4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
UBE3BQ7Z3V4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
UBE3BQ7Z3V4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
UBE3BQ7Z3V4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
UBE3BQ7Z3V4 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
UBE3BQ7Z3V4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
UBE3BQ7Z3V4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC21.84■■□□□ 1.09
UBE3BQ7Z3V4 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC21.84■■□□□ 1.09
UBE3BQ7Z3V4 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC21.84■■□□□ 1.09
UBE3BQ7Z3V4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC21.84■■□□□ 1.09
UBE3BQ7Z3V4 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC21.84■■□□□ 1.09
UBE3BQ7Z3V4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
UBE3BQ7Z3V4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
UBE3BQ7Z3V4 AC108751.1-201ENST00000490852 363 ntBASIC21.84■■□□□ 1.09
UBE3BQ7Z3V4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
UBE3BQ7Z3V4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC21.84■■□□□ 1.09
UBE3BQ7Z3V4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC21.84■■□□□ 1.09
UBE3BQ7Z3V4 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC21.84■■□□□ 1.09
UBE3BQ7Z3V4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
UBE3BQ7Z3V4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC21.84■■□□□ 1.09
UBE3BQ7Z3V4 FAM197Y3-203ENST00000618346 717 ntBASIC21.84■■□□□ 1.09
UBE3BQ7Z3V4 PGM5P2-202ENST00000637225 1043 ntBASIC21.84■■□□□ 1.09
UBE3BQ7Z3V4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
UBE3BQ7Z3V4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
UBE3BQ7Z3V4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
UBE3BQ7Z3V4 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC21.84■■□□□ 1.09
UBE3BQ7Z3V4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
UBE3BQ7Z3V4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.84■■□□□ 1.09
UBE3BQ7Z3V4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
UBE3BQ7Z3V4 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
UBE3BQ7Z3V4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
UBE3BQ7Z3V4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
UBE3BQ7Z3V4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC21.84■■□□□ 1.09
UBE3BQ7Z3V4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
UBE3BQ7Z3V4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
UBE3BQ7Z3V4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.09
UBE3BQ7Z3V4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC21.83■■□□□ 1.09
UBE3BQ7Z3V4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
UBE3BQ7Z3V4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
UBE3BQ7Z3V4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC21.83■■□□□ 1.09
UBE3BQ7Z3V4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
UBE3BQ7Z3V4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
UBE3BQ7Z3V4 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
UBE3BQ7Z3V4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
UBE3BQ7Z3V4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC21.83■■□□□ 1.09
UBE3BQ7Z3V4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.09
UBE3BQ7Z3V4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC21.83■■□□□ 1.09
UBE3BQ7Z3V4 LINC00982-205ENST00000420957 435 ntBASIC21.83■■□□□ 1.09
UBE3BQ7Z3V4 RPP21-221ENST00000428040 594 ntTSL 2 BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms