Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.17■□□□□ 0.82
USH1GQ495M9 AC105339.3-201ENST00000560043 636 ntBASIC20.17■□□□□ 0.82
USH1GQ495M9 STK25P1-201ENST00000585406 838 ntBASIC20.17■□□□□ 0.82
USH1GQ495M9 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
USH1GQ495M9 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.17■□□□□ 0.82
USH1GQ495M9 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.17■□□□□ 0.82
USH1GQ495M9 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.17■□□□□ 0.82
USH1GQ495M9 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.17■□□□□ 0.82
USH1GQ495M9 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USH1GQ495M9 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
USH1GQ495M9 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
USH1GQ495M9 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
USH1GQ495M9 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
USH1GQ495M9 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.17■□□□□ 0.82
USH1GQ495M9 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
USH1GQ495M9 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.17■□□□□ 0.82
USH1GQ495M9 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
USH1GQ495M9 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.17■□□□□ 0.82
USH1GQ495M9 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
USH1GQ495M9 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USH1GQ495M9 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.16■□□□□ 0.82
USH1GQ495M9 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
USH1GQ495M9 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
USH1GQ495M9 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.16■□□□□ 0.82
USH1GQ495M9 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
USH1GQ495M9 AL390961.4-201ENST00000623958 2535 ntBASIC20.16■□□□□ 0.82
USH1GQ495M9 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USH1GQ495M9 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
USH1GQ495M9 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
USH1GQ495M9 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
USH1GQ495M9 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
USH1GQ495M9 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USH1GQ495M9 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
USH1GQ495M9 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
USH1GQ495M9 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
USH1GQ495M9 MIR574-201ENST00000385209 96 ntBASIC20.16■□□□□ 0.82
USH1GQ495M9 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
USH1GQ495M9 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.16■□□□□ 0.82
USH1GQ495M9 IGHV3-22-201ENST00000520721 359 ntBASIC20.16■□□□□ 0.82
USH1GQ495M9 AC106730.1-201ENST00000566722 1090 ntBASIC20.16■□□□□ 0.82
USH1GQ495M9 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.16■□□□□ 0.82
USH1GQ495M9 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USH1GQ495M9 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
USH1GQ495M9 AC104109.2-201ENST00000602919 1418 ntBASIC20.16■□□□□ 0.82
USH1GQ495M9 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
USH1GQ495M9 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.16■□□□□ 0.82
USH1GQ495M9 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.16■□□□□ 0.82
USH1GQ495M9 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
USH1GQ495M9 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
USH1GQ495M9 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USH1GQ495M9 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
USH1GQ495M9 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.16■□□□□ 0.82
USH1GQ495M9 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USH1GQ495M9 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.15■□□□□ 0.82
USH1GQ495M9 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USH1GQ495M9 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
USH1GQ495M9 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
USH1GQ495M9 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.15■□□□□ 0.82
USH1GQ495M9 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.15■□□□□ 0.82
USH1GQ495M9 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
USH1GQ495M9 MIR940-201ENST00000401276 94 ntBASIC20.15■□□□□ 0.82
USH1GQ495M9 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
USH1GQ495M9 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
USH1GQ495M9 PRYP5-201ENST00000451909 266 ntBASIC20.15■□□□□ 0.82
USH1GQ495M9 AC002558.1-201ENST00000488906 803 ntBASIC20.15■□□□□ 0.82
USH1GQ495M9 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.15■□□□□ 0.82
USH1GQ495M9 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
USH1GQ495M9 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.15■□□□□ 0.82
USH1GQ495M9 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.15■□□□□ 0.82
USH1GQ495M9 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.15■□□□□ 0.82
USH1GQ495M9 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
USH1GQ495M9 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.15■□□□□ 0.82
USH1GQ495M9 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
USH1GQ495M9 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
USH1GQ495M9 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USH1GQ495M9 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
USH1GQ495M9 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
USH1GQ495M9 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.15■□□□□ 0.82
USH1GQ495M9 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USH1GQ495M9 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USH1GQ495M9 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
USH1GQ495M9 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.14■□□□□ 0.82
USH1GQ495M9 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
USH1GQ495M9 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
USH1GQ495M9 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
USH1GQ495M9 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
USH1GQ495M9 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
USH1GQ495M9 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
USH1GQ495M9 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
USH1GQ495M9 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.14■□□□□ 0.81
USH1GQ495M9 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
USH1GQ495M9 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
USH1GQ495M9 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.14■□□□□ 0.81
USH1GQ495M9 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.14■□□□□ 0.81
USH1GQ495M9 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.14■□□□□ 0.81
USH1GQ495M9 SIGLEC30P-201ENST00000455569 941 ntBASIC20.14■□□□□ 0.81
USH1GQ495M9 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.14■□□□□ 0.81
USH1GQ495M9 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.14■□□□□ 0.81
USH1GQ495M9 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.14■□□□□ 0.81
USH1GQ495M9 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms