Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.28■□□□□ 0.36
CDK3Q00526 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.28■□□□□ 0.36
CDK3Q00526 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.28■□□□□ 0.36
CDK3Q00526 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.28■□□□□ 0.36
CDK3Q00526 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.28■□□□□ 0.36
CDK3Q00526 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CDK3Q00526 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.28■□□□□ 0.36
CDK3Q00526 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.28■□□□□ 0.36
CDK3Q00526 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDK3Q00526 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDK3Q00526 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.28■□□□□ 0.36
CDK3Q00526 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDK3Q00526 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CDK3Q00526 LINC00304-203ENST00000565008 1864 ntBASIC17.28■□□□□ 0.36
CDK3Q00526 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDK3Q00526 AC008764.6-201ENST00000595909 2069 ntBASIC17.28■□□□□ 0.36
CDK3Q00526 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDK3Q00526 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDK3Q00526 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CDK3Q00526 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.28■□□□□ 0.36
CDK3Q00526 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDK3Q00526 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDK3Q00526 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDK3Q00526 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDK3Q00526 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.27■□□□□ 0.36
CDK3Q00526 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDK3Q00526 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDK3Q00526 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDK3Q00526 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDK3Q00526 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CDK3Q00526 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDK3Q00526 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.27■□□□□ 0.36
CDK3Q00526 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDK3Q00526 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDK3Q00526 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.27■□□□□ 0.36
CDK3Q00526 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.27■□□□□ 0.36
CDK3Q00526 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.27■□□□□ 0.36
CDK3Q00526 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.27■□□□□ 0.36
CDK3Q00526 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.27■□□□□ 0.36
CDK3Q00526 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.27■□□□□ 0.36
CDK3Q00526 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CDK3Q00526 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.27■□□□□ 0.36
CDK3Q00526 AL589182.2-201ENST00000619332 1049 ntBASIC17.27■□□□□ 0.36
CDK3Q00526 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDK3Q00526 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
CDK3Q00526 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDK3Q00526 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CDK3Q00526 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.27■□□□□ 0.35
CDK3Q00526 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.27■□□□□ 0.35
CDK3Q00526 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDK3Q00526 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDK3Q00526 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
CDK3Q00526 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.27■□□□□ 0.35
CDK3Q00526 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDK3Q00526 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDK3Q00526 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CDK3Q00526 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDK3Q00526 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDK3Q00526 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDK3Q00526 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.26■□□□□ 0.35
CDK3Q00526 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.26■□□□□ 0.35
CDK3Q00526 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDK3Q00526 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDK3Q00526 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CDK3Q00526 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
CDK3Q00526 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CDK3Q00526 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CDK3Q00526 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.26■□□□□ 0.35
CDK3Q00526 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.26■□□□□ 0.35
CDK3Q00526 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.26■□□□□ 0.35
CDK3Q00526 AC092910.1-201ENST00000482027 1129 ntBASIC17.26■□□□□ 0.35
CDK3Q00526 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDK3Q00526 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.26■□□□□ 0.35
CDK3Q00526 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CDK3Q00526 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.26■□□□□ 0.35
CDK3Q00526 AC105339.3-201ENST00000560043 636 ntBASIC17.26■□□□□ 0.35
CDK3Q00526 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.26■□□□□ 0.35
CDK3Q00526 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.26■□□□□ 0.35
CDK3Q00526 AC006557.2-201ENST00000592985 1240 ntBASIC17.26■□□□□ 0.35
CDK3Q00526 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDK3Q00526 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CDK3Q00526 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.26■□□□□ 0.35
CDK3Q00526 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.26■□□□□ 0.35
CDK3Q00526 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CDK3Q00526 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDK3Q00526 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
CDK3Q00526 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CDK3Q00526 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDK3Q00526 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CDK3Q00526 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDK3Q00526 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDK3Q00526 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDK3Q00526 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDK3Q00526 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDK3Q00526 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.25■□□□□ 0.35
CDK3Q00526 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDK3Q00526 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.25■□□□□ 0.35
CDK3Q00526 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.25■□□□□ 0.35
CDK3Q00526 SLC25A1P1-201ENST00000528351 927 ntBASIC17.25■□□□□ 0.35
CDK3Q00526 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms