Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.68■□□□□ 0.9
RHBDL3P58872 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.68■□□□□ 0.9
RHBDL3P58872 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RHBDL3P58872 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.68■□□□□ 0.9
RHBDL3P58872 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RHBDL3P58872 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RHBDL3P58872 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RHBDL3P58872 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RHBDL3P58872 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RHBDL3P58872 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.68■□□□□ 0.9
RHBDL3P58872 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RHBDL3P58872 RHOQP3-201ENST00000437982 621 ntBASIC20.68■□□□□ 0.9
RHBDL3P58872 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.68■□□□□ 0.9
RHBDL3P58872 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.68■□□□□ 0.9
RHBDL3P58872 YBX1P5-201ENST00000509441 847 ntBASIC20.68■□□□□ 0.9
RHBDL3P58872 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC20.68■□□□□ 0.9
RHBDL3P58872 AC096734.2-201ENST00000562054 433 ntBASIC20.68■□□□□ 0.9
RHBDL3P58872 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RHBDL3P58872 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RHBDL3P58872 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.68■□□□□ 0.9
RHBDL3P58872 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RHBDL3P58872 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RHBDL3P58872 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RHBDL3P58872 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RHBDL3P58872 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.68■□□□□ 0.9
RHBDL3P58872 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RHBDL3P58872 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RHBDL3P58872 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RHBDL3P58872 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.67■□□□□ 0.9
RHBDL3P58872 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RHBDL3P58872 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RHBDL3P58872 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RHBDL3P58872 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RHBDL3P58872 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.67■□□□□ 0.9
RHBDL3P58872 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC20.67■□□□□ 0.9
RHBDL3P58872 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.67■□□□□ 0.9
RHBDL3P58872 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.67■□□□□ 0.9
RHBDL3P58872 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.67■□□□□ 0.9
RHBDL3P58872 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RHBDL3P58872 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC20.67■□□□□ 0.9
RHBDL3P58872 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.67■□□□□ 0.9
RHBDL3P58872 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RHBDL3P58872 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RHBDL3P58872 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RHBDL3P58872 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RHBDL3P58872 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RHBDL3P58872 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RHBDL3P58872 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RHBDL3P58872 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
RHBDL3P58872 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RHBDL3P58872 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RHBDL3P58872 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.66■□□□□ 0.9
RHBDL3P58872 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RHBDL3P58872 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.66■□□□□ 0.9
RHBDL3P58872 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RHBDL3P58872 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RHBDL3P58872 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
RHBDL3P58872 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RHBDL3P58872 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RHBDL3P58872 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC20.66■□□□□ 0.9
RHBDL3P58872 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.66■□□□□ 0.9
RHBDL3P58872 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20.66■□□□□ 0.9
RHBDL3P58872 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RHBDL3P58872 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RHBDL3P58872 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.66■□□□□ 0.9
RHBDL3P58872 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.66■□□□□ 0.9
RHBDL3P58872 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RHBDL3P58872 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RHBDL3P58872 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RHBDL3P58872 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
RHBDL3P58872 PI4KAP1-204ENST00000612579 1703 ntBASIC20.66■□□□□ 0.9
RHBDL3P58872 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RHBDL3P58872 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
RHBDL3P58872 AC012317.2-201ENST00000623305 2251 ntBASIC20.66■□□□□ 0.9
RHBDL3P58872 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RHBDL3P58872 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RHBDL3P58872 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.65■□□□□ 0.9
RHBDL3P58872 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RHBDL3P58872 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RHBDL3P58872 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RHBDL3P58872 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.65■□□□□ 0.9
RHBDL3P58872 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RHBDL3P58872 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RHBDL3P58872 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RHBDL3P58872 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RHBDL3P58872 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.65■□□□□ 0.9
RHBDL3P58872 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.65■□□□□ 0.9
RHBDL3P58872 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RHBDL3P58872 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RHBDL3P58872 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RHBDL3P58872 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RHBDL3P58872 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RHBDL3P58872 RPS8P6-201ENST00000426177 609 ntBASIC20.65■□□□□ 0.9
RHBDL3P58872 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.65■□□□□ 0.9
RHBDL3P58872 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
RHBDL3P58872 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.65■□□□□ 0.9
RHBDL3P58872 AC004877.2-201ENST00000623941 599 ntBASIC20.65■□□□□ 0.9
RHBDL3P58872 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RHBDL3P58872 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.65■□□□□ 0.9
RHBDL3P58872 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms