Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDR1P51861 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.27■□□□□ 0.68
CDR1P51861 AC090616.6-201ENST00000582640 721 ntBASIC19.27■□□□□ 0.68
CDR1P51861 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CDR1P51861 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.27■□□□□ 0.68
CDR1P51861 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDR1P51861 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDR1P51861 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
CDR1P51861 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDR1P51861 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.67
CDR1P51861 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
CDR1P51861 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
CDR1P51861 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDR1P51861 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CDR1P51861 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDR1P51861 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDR1P51861 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDR1P51861 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
CDR1P51861 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDR1P51861 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDR1P51861 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDR1P51861 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDR1P51861 TNRC18P3-201ENST00000441896 2691 ntBASIC19.26■□□□□ 0.67
CDR1P51861 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.26■□□□□ 0.67
CDR1P51861 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDR1P51861 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDR1P51861 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDR1P51861 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.26■□□□□ 0.67
CDR1P51861 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CDR1P51861 AC104819.1-201ENST00000504587 486 ntBASIC19.26■□□□□ 0.67
CDR1P51861 GUSBP12-201ENST00000513727 720 ntBASIC19.26■□□□□ 0.67
CDR1P51861 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.26■□□□□ 0.67
CDR1P51861 RN7SL510P-201ENST00000581311 263 ntBASIC19.26■□□□□ 0.67
CDR1P51861 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CDR1P51861 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.26■□□□□ 0.67
CDR1P51861 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDR1P51861 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDR1P51861 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDR1P51861 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.26■□□□□ 0.67
CDR1P51861 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDR1P51861 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDR1P51861 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
CDR1P51861 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.26■□□□□ 0.67
CDR1P51861 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.26■□□□□ 0.67
CDR1P51861 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDR1P51861 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CDR1P51861 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDR1P51861 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDR1P51861 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDR1P51861 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CDR1P51861 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDR1P51861 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDR1P51861 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDR1P51861 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDR1P51861 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDR1P51861 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.25■□□□□ 0.67
CDR1P51861 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDR1P51861 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDR1P51861 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.25■□□□□ 0.67
CDR1P51861 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDR1P51861 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDR1P51861 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDR1P51861 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.25■□□□□ 0.67
CDR1P51861 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDR1P51861 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDR1P51861 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CDR1P51861 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDR1P51861 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDR1P51861 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDR1P51861 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
CDR1P51861 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDR1P51861 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDR1P51861 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.25■□□□□ 0.67
CDR1P51861 EMBP1-201ENST00000458200 901 ntBASIC19.25■□□□□ 0.67
CDR1P51861 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDR1P51861 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDR1P51861 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDR1P51861 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.25■□□□□ 0.67
CDR1P51861 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.25■□□□□ 0.67
CDR1P51861 IFNL4P1-201ENST00000607083 540 ntBASIC19.25■□□□□ 0.67
CDR1P51861 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.25■□□□□ 0.67
CDR1P51861 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.25■□□□□ 0.67
CDR1P51861 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CDR1P51861 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDR1P51861 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CDR1P51861 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDR1P51861 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDR1P51861 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDR1P51861 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDR1P51861 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.24■□□□□ 0.67
CDR1P51861 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDR1P51861 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDR1P51861 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDR1P51861 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDR1P51861 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDR1P51861 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.24■□□□□ 0.67
CDR1P51861 NUS1P2-201ENST00000417358 873 ntBASIC19.24■□□□□ 0.67
CDR1P51861 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
CDR1P51861 AC246785.2-201ENST00000432512 513 ntBASIC19.24■□□□□ 0.67
CDR1P51861 KRT17P6-201ENST00000453795 1220 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms