Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 RARRES2P10-201ENST00000564312 460 ntBASIC14.43□□□□□ -0.1
NKX2-1P43699 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC14.43□□□□□ -0.1
NKX2-1P43699 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC14.43□□□□□ -0.1
NKX2-1P43699 AC008687.5-201ENST00000593746 558 ntBASIC14.43□□□□□ -0.1
NKX2-1P43699 DGCR10-201ENST00000609839 495 ntBASIC14.43□□□□□ -0.1
NKX2-1P43699 AC073648.6-201ENST00000641589 218 ntBASIC14.43□□□□□ -0.1
NKX2-1P43699 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-1P43699 CICP6-201ENST00000457191 2729 ntBASIC14.43□□□□□ -0.1
NKX2-1P43699 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-1P43699 FLJ38576-201ENST00000623820 2459 ntBASIC14.43□□□□□ -0.1
NKX2-1P43699 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-1P43699 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-1P43699 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-1P43699 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-1P43699 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.43□□□□□ -0.1
NKX2-1P43699 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
NKX2-1P43699 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-1P43699 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC14.43□□□□□ -0.1
NKX2-1P43699 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
NKX2-1P43699 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-1P43699 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-1P43699 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-1P43699 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-1P43699 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-1P43699 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.43□□□□□ -0.1
NKX2-1P43699 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-1P43699 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.42□□□□□ -0.1
NKX2-1P43699 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.42□□□□□ -0.1
NKX2-1P43699 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-1P43699 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-1P43699 AC063926.3-201ENST00000624734 5658 ntBASIC14.42□□□□□ -0.1
NKX2-1P43699 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
NKX2-1P43699 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-1P43699 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
NKX2-1P43699 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-1P43699 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-1P43699 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.42□□□□□ -0.1
NKX2-1P43699 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-1P43699 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
NKX2-1P43699 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-1P43699 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-1P43699 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-1P43699 DDX43P3-201ENST00000441064 443 ntBASIC14.42□□□□□ -0.1
NKX2-1P43699 AC128676.1-201ENST00000454392 318 ntBASIC14.42□□□□□ -0.1
NKX2-1P43699 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.42□□□□□ -0.1
NKX2-1P43699 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC14.42□□□□□ -0.1
NKX2-1P43699 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC14.42□□□□□ -0.1
NKX2-1P43699 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC14.42□□□□□ -0.1
NKX2-1P43699 CYGB-204ENST00000589342 815 ntTSL 3 BASIC14.42□□□□□ -0.1
NKX2-1P43699 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-1P43699 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-1P43699 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC14.42□□□□□ -0.1
NKX2-1P43699 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-1P43699 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-1P43699 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-1P43699 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.42□□□□□ -0.1
NKX2-1P43699 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
NKX2-1P43699 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-1P43699 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-1P43699 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-1P43699 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-1P43699 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
NKX2-1P43699 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-1P43699 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-1P43699 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.42□□□□□ -0.1
NKX2-1P43699 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
NKX2-1P43699 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-1P43699 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-1P43699 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-1P43699 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-1P43699 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
NKX2-1P43699 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-1P43699 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-1P43699 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
NKX2-1P43699 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.42□□□□□ -0.1
NKX2-1P43699 AL603756.1-201ENST00000606511 2163 ntBASIC14.41□□□□□ -0.1
NKX2-1P43699 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-1P43699 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-1P43699 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-1P43699 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-1P43699 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-1P43699 AL162727.3-201ENST00000635661 2787 ntBASIC14.41□□□□□ -0.1
NKX2-1P43699 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-1P43699 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
NKX2-1P43699 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.41□□□□□ -0.1
NKX2-1P43699 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-1P43699 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-1P43699 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.41□□□□□ -0.1
NKX2-1P43699 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-1P43699 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-1P43699 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC14.41□□□□□ -0.1
NKX2-1P43699 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-1P43699 FAM201B-201ENST00000458407 597 ntBASIC14.41□□□□□ -0.1
NKX2-1P43699 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC14.41□□□□□ -0.1
NKX2-1P43699 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC14.41□□□□□ -0.1
NKX2-1P43699 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC14.41□□□□□ -0.1
NKX2-1P43699 RPS15-203ENST00000586096 570 ntTSL 2 BASIC14.41□□□□□ -0.1
NKX2-1P43699 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
NKX2-1P43699 AC112497.1-201ENST00000624824 639 ntBASIC14.41□□□□□ -0.1
NKX2-1P43699 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms