Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 GGTLC5P-201ENST00000617623 998 ntBASIC18.35■□□□□ 0.53
MTHFRP42898 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MTHFRP42898 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
MTHFRP42898 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
MTHFRP42898 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.35■□□□□ 0.53
MTHFRP42898 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
MTHFRP42898 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MTHFRP42898 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MTHFRP42898 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
MTHFRP42898 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MTHFRP42898 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
MTHFRP42898 AC148477.5-201ENST00000625164 1645 ntBASIC18.34■□□□□ 0.53
MTHFRP42898 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
MTHFRP42898 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
MTHFRP42898 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
MTHFRP42898 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MTHFRP42898 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
MTHFRP42898 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MTHFRP42898 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MTHFRP42898 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MTHFRP42898 ESPNP-201ENST00000270691 2015 ntBASIC18.34■□□□□ 0.53
MTHFRP42898 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MTHFRP42898 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MTHFRP42898 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MTHFRP42898 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.34■□□□□ 0.53
MTHFRP42898 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.34■□□□□ 0.53
MTHFRP42898 DUTP2-201ENST00000519164 463 ntBASIC18.34■□□□□ 0.53
MTHFRP42898 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.34■□□□□ 0.53
MTHFRP42898 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.34■□□□□ 0.53
MTHFRP42898 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.34■□□□□ 0.53
MTHFRP42898 KRT19P2-202ENST00000557173 1012 ntBASIC18.34■□□□□ 0.53
MTHFRP42898 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
MTHFRP42898 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.34■□□□□ 0.53
MTHFRP42898 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MTHFRP42898 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.34■□□□□ 0.53
MTHFRP42898 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.34■□□□□ 0.53
MTHFRP42898 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.34■□□□□ 0.53
MTHFRP42898 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.34■□□□□ 0.53
MTHFRP42898 AC010507.1-201ENST00000633895 436 ntBASIC18.34■□□□□ 0.53
MTHFRP42898 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MTHFRP42898 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.34■□□□□ 0.53
MTHFRP42898 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MTHFRP42898 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
MTHFRP42898 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
MTHFRP42898 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
MTHFRP42898 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MTHFRP42898 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MTHFRP42898 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MTHFRP42898 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MTHFRP42898 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MTHFRP42898 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MTHFRP42898 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
MTHFRP42898 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MTHFRP42898 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MTHFRP42898 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MTHFRP42898 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
MTHFRP42898 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
MTHFRP42898 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
MTHFRP42898 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.33■□□□□ 0.53
MTHFRP42898 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
MTHFRP42898 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MTHFRP42898 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.33■□□□□ 0.53
MTHFRP42898 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MTHFRP42898 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
MTHFRP42898 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MTHFRP42898 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MTHFRP42898 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MTHFRP42898 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.33■□□□□ 0.52
MTHFRP42898 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MTHFRP42898 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MTHFRP42898 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MTHFRP42898 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.33■□□□□ 0.52
MTHFRP42898 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
MTHFRP42898 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
MTHFRP42898 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
MTHFRP42898 FAM58CP-201ENST00000435741 640 ntBASIC18.33■□□□□ 0.52
MTHFRP42898 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.33■□□□□ 0.52
MTHFRP42898 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
MTHFRP42898 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.33■□□□□ 0.52
MTHFRP42898 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.33■□□□□ 0.52
MTHFRP42898 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.33■□□□□ 0.52
MTHFRP42898 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.33■□□□□ 0.52
MTHFRP42898 SPCS2P1-201ENST00000561636 679 ntBASIC18.33■□□□□ 0.52
MTHFRP42898 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.33■□□□□ 0.52
MTHFRP42898 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.33■□□□□ 0.52
MTHFRP42898 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.33■□□□□ 0.52
MTHFRP42898 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
MTHFRP42898 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.33■□□□□ 0.52
MTHFRP42898 AC093028.1-201ENST00000622998 982 ntBASIC18.33■□□□□ 0.52
MTHFRP42898 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
MTHFRP42898 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MTHFRP42898 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MTHFRP42898 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MTHFRP42898 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MTHFRP42898 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
MTHFRP42898 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
MTHFRP42898 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
MTHFRP42898 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
MTHFRP42898 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
MTHFRP42898 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms