Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 SLC25A1P2-201ENST00000430693 912 ntBASIC20.96■□□□□ 0.95
NCLP19338 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.96■□□□□ 0.95
NCLP19338 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.96■□□□□ 0.95
NCLP19338 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.96■□□□□ 0.95
NCLP19338 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NCLP19338 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCLP19338 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCLP19338 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC20.96■□□□□ 0.95
NCLP19338 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCLP19338 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCLP19338 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCLP19338 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
NCLP19338 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.96■□□□□ 0.95
NCLP19338 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCLP19338 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCLP19338 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.96■□□□□ 0.95
NCLP19338 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCLP19338 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCLP19338 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
NCLP19338 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCLP19338 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NCLP19338 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCLP19338 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
NCLP19338 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.95■□□□□ 0.95
NCLP19338 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NCLP19338 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NCLP19338 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NCLP19338 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NCLP19338 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC20.95■□□□□ 0.94
NCLP19338 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NCLP19338 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NCLP19338 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
NCLP19338 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NCLP19338 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NCLP19338 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NCLP19338 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC20.95■□□□□ 0.94
NCLP19338 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NCLP19338 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NCLP19338 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NCLP19338 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.95■□□□□ 0.94
NCLP19338 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NCLP19338 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
NCLP19338 AL049597.2-201ENST00000565575 961 ntBASIC20.95■□□□□ 0.94
NCLP19338 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NCLP19338 AC116562.4-202ENST00000641738 218 ntBASIC20.95■□□□□ 0.94
NCLP19338 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NCLP19338 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NCLP19338 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NCLP19338 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NCLP19338 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
NCLP19338 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.95■□□□□ 0.94
NCLP19338 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
NCLP19338 HOXB1-202ENST00000577092 1414 ntBASIC20.95■□□□□ 0.94
NCLP19338 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NCLP19338 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NCLP19338 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
NCLP19338 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
NCLP19338 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NCLP19338 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
NCLP19338 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NCLP19338 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NCLP19338 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
NCLP19338 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
NCLP19338 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NCLP19338 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NCLP19338 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NCLP19338 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
NCLP19338 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.94■□□□□ 0.94
NCLP19338 CCR12P-201ENST00000446203 998 ntBASIC20.94■□□□□ 0.94
NCLP19338 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.94■□□□□ 0.94
NCLP19338 AP003041.3-201ENST00000527151 707 ntBASIC20.94■□□□□ 0.94
NCLP19338 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.94■□□□□ 0.94
NCLP19338 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.94■□□□□ 0.94
NCLP19338 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.94■□□□□ 0.94
NCLP19338 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NCLP19338 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.94■□□□□ 0.94
NCLP19338 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NCLP19338 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NCLP19338 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NCLP19338 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NCLP19338 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NCLP19338 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NCLP19338 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
NCLP19338 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NCLP19338 LIN28AP1-201ENST00000429574 405 ntBASIC20.93■□□□□ 0.94
NCLP19338 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.93■□□□□ 0.94
NCLP19338 AL445228.2-201ENST00000605589 952 ntBASIC20.93■□□□□ 0.94
NCLP19338 CR769767.2-201ENST00000622735 460 ntBASIC20.93■□□□□ 0.94
NCLP19338 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.93■□□□□ 0.94
NCLP19338 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC20.93■□□□□ 0.94
NCLP19338 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.93■□□□□ 0.94
NCLP19338 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.93■□□□□ 0.94
NCLP19338 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.93■□□□□ 0.94
NCLP19338 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.93■□□□□ 0.94
NCLP19338 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
NCLP19338 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NCLP19338 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.93■□□□□ 0.94
NCLP19338 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
NCLP19338 AL118508.1-201ENST00000613502 2345 ntBASIC20.93■□□□□ 0.94
NCLP19338 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms