Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRKCAP17252 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.33■□□□□ 0.2
PRKCAP17252 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRKCAP17252 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.33■□□□□ 0.2
PRKCAP17252 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.33■□□□□ 0.2
PRKCAP17252 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.33■□□□□ 0.2
PRKCAP17252 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
PRKCAP17252 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRKCAP17252 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.33■□□□□ 0.2
PRKCAP17252 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.33■□□□□ 0.2
PRKCAP17252 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.33■□□□□ 0.2
PRKCAP17252 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.33■□□□□ 0.2
PRKCAP17252 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.33■□□□□ 0.2
PRKCAP17252 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
PRKCAP17252 AC022898.2-201ENST00000616822 1312 ntBASIC16.33■□□□□ 0.2
PRKCAP17252 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PRKCAP17252 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.33■□□□□ 0.2
PRKCAP17252 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.33■□□□□ 0.2
PRKCAP17252 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRKCAP17252 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.33■□□□□ 0.2
PRKCAP17252 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRKCAP17252 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRKCAP17252 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.33■□□□□ 0.2
PRKCAP17252 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRKCAP17252 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
PRKCAP17252 AC134043.2-201ENST00000624206 2238 ntBASIC16.33■□□□□ 0.2
PRKCAP17252 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRKCAP17252 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PRKCAP17252 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRKCAP17252 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRKCAP17252 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRKCAP17252 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRKCAP17252 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRKCAP17252 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRKCAP17252 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRKCAP17252 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRKCAP17252 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRKCAP17252 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PRKCAP17252 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRKCAP17252 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRKCAP17252 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PRKCAP17252 GNAS-203ENST00000306120 1878 ntBASIC16.32■□□□□ 0.2
PRKCAP17252 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRKCAP17252 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRKCAP17252 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.32■□□□□ 0.2
PRKCAP17252 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRKCAP17252 IER3-202ENST00000376377 1350 ntBASIC16.32■□□□□ 0.2
PRKCAP17252 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRKCAP17252 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.32■□□□□ 0.2
PRKCAP17252 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRKCAP17252 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRKCAP17252 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRKCAP17252 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRKCAP17252 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRKCAP17252 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.32■□□□□ 0.2
PRKCAP17252 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRKCAP17252 KRT8P26-201ENST00000534154 1276 ntBASIC16.32■□□□□ 0.2
PRKCAP17252 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.32■□□□□ 0.2
PRKCAP17252 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.32■□□□□ 0.2
PRKCAP17252 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.32■□□□□ 0.2
PRKCAP17252 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.32■□□□□ 0.2
PRKCAP17252 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.32■□□□□ 0.2
PRKCAP17252 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.32■□□□□ 0.2
PRKCAP17252 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRKCAP17252 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PRKCAP17252 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PRKCAP17252 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRKCAP17252 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRKCAP17252 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRKCAP17252 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRKCAP17252 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRKCAP17252 AD000864.1-201ENST00000624076 2295 ntBASIC16.31■□□□□ 0.2
PRKCAP17252 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRKCAP17252 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRKCAP17252 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PRKCAP17252 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.31■□□□□ 0.2
PRKCAP17252 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.31■□□□□ 0.2
PRKCAP17252 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRKCAP17252 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRKCAP17252 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
PRKCAP17252 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PRKCAP17252 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.31■□□□□ 0.2
PRKCAP17252 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PRKCAP17252 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
PRKCAP17252 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.31■□□□□ 0.2
PRKCAP17252 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PRKCAP17252 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.31■□□□□ 0.2
PRKCAP17252 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.31■□□□□ 0.2
PRKCAP17252 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRKCAP17252 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PRKCAP17252 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PRKCAP17252 AL358472.4-201ENST00000633140 710 ntBASIC16.31■□□□□ 0.2
PRKCAP17252 AP000550.4-202ENST00000639755 178 ntBASIC16.31■□□□□ 0.2
PRKCAP17252 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.31■□□□□ 0.2
PRKCAP17252 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRKCAP17252 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRKCAP17252 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRKCAP17252 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PRKCAP17252 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRKCAP17252 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms