Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
IGHV3-43DP0DP04 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
IGHV3-43DP0DP04 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.64□□□□□ -0.07
IGHV3-43DP0DP04 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC14.64□□□□□ -0.07
IGHV3-43DP0DP04 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.64□□□□□ -0.07
IGHV3-43DP0DP04 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
IGHV3-43DP0DP04 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.64□□□□□ -0.07
IGHV3-43DP0DP04 CROCCP2-202ENST00000412962 2773 ntBASIC14.64□□□□□ -0.07
IGHV3-43DP0DP04 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
IGHV3-43DP0DP04 FER1L4-210ENST00000615531 5998 ntBASIC14.64□□□□□ -0.07
IGHV3-43DP0DP04 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
IGHV3-43DP0DP04 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC14.64□□□□□ -0.07
IGHV3-43DP0DP04 AL645929.1-201ENST00000420084 975 ntBASIC14.64□□□□□ -0.07
IGHV3-43DP0DP04 DDX43P3-201ENST00000441064 443 ntBASIC14.64□□□□□ -0.07
IGHV3-43DP0DP04 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
IGHV3-43DP0DP04 AC068472.1-201ENST00000474589 881 ntBASIC14.64□□□□□ -0.07
IGHV3-43DP0DP04 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
IGHV3-43DP0DP04 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.64□□□□□ -0.07
IGHV3-43DP0DP04 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC14.64□□□□□ -0.07
IGHV3-43DP0DP04 LINC01238-205ENST00000567549 1107 ntBASIC14.64□□□□□ -0.07
IGHV3-43DP0DP04 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.64□□□□□ -0.07
IGHV3-43DP0DP04 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.64□□□□□ -0.07
IGHV3-43DP0DP04 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
IGHV3-43DP0DP04 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
IGHV3-43DP0DP04 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
IGHV3-43DP0DP04 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
IGHV3-43DP0DP04 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
IGHV3-43DP0DP04 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
IGHV3-43DP0DP04 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
IGHV3-43DP0DP04 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
IGHV3-43DP0DP04 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.64□□□□□ -0.07
IGHV3-43DP0DP04 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.64□□□□□ -0.07
IGHV3-43DP0DP04 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
IGHV3-43DP0DP04 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
IGHV3-43DP0DP04 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
IGHV3-43DP0DP04 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
IGHV3-43DP0DP04 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
IGHV3-43DP0DP04 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
IGHV3-43DP0DP04 AL023806.1-201ENST00000603994 1649 ntBASIC14.63□□□□□ -0.07
IGHV3-43DP0DP04 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IGHV3-43DP0DP04 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IGHV3-43DP0DP04 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
IGHV3-43DP0DP04 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IGHV3-43DP0DP04 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC14.63□□□□□ -0.07
IGHV3-43DP0DP04 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
IGHV3-43DP0DP04 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
IGHV3-43DP0DP04 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
IGHV3-43DP0DP04 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.63□□□□□ -0.07
IGHV3-43DP0DP04 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.63□□□□□ -0.07
IGHV3-43DP0DP04 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.63□□□□□ -0.07
IGHV3-43DP0DP04 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.63□□□□□ -0.07
IGHV3-43DP0DP04 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.63□□□□□ -0.07
IGHV3-43DP0DP04 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.63□□□□□ -0.07
IGHV3-43DP0DP04 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IGHV3-43DP0DP04 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
IGHV3-43DP0DP04 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
IGHV3-43DP0DP04 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IGHV3-43DP0DP04 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
IGHV3-43DP0DP04 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.63□□□□□ -0.07
IGHV3-43DP0DP04 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IGHV3-43DP0DP04 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.63□□□□□ -0.07
IGHV3-43DP0DP04 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.63□□□□□ -0.07
IGHV3-43DP0DP04 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
IGHV3-43DP0DP04 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IGHV3-43DP0DP04 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
IGHV3-43DP0DP04 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IGHV3-43DP0DP04 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
IGHV3-43DP0DP04 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
IGHV3-43DP0DP04 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
IGHV3-43DP0DP04 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
IGHV3-43DP0DP04 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
IGHV3-43DP0DP04 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
IGHV3-43DP0DP04 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
IGHV3-43DP0DP04 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
IGHV3-43DP0DP04 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
IGHV3-43DP0DP04 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
IGHV3-43DP0DP04 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
IGHV3-43DP0DP04 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
IGHV3-43DP0DP04 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
IGHV3-43DP0DP04 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
IGHV3-43DP0DP04 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
IGHV3-43DP0DP04 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
IGHV3-43DP0DP04 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.62□□□□□ -0.07
IGHV3-43DP0DP04 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.62□□□□□ -0.07
IGHV3-43DP0DP04 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.62□□□□□ -0.07
IGHV3-43DP0DP04 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.62□□□□□ -0.07
IGHV3-43DP0DP04 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
IGHV3-43DP0DP04 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.62□□□□□ -0.07
IGHV3-43DP0DP04 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
IGHV3-43DP0DP04 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms