Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC13.18□□□□□ -0.3
SH2D1AO60880 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.18□□□□□ -0.3
SH2D1AO60880 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SH2D1AO60880 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
SH2D1AO60880 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SH2D1AO60880 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
SH2D1AO60880 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC13.18□□□□□ -0.3
SH2D1AO60880 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SH2D1AO60880 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SH2D1AO60880 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC13.18□□□□□ -0.3
SH2D1AO60880 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SH2D1AO60880 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SH2D1AO60880 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
SH2D1AO60880 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SH2D1AO60880 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
SH2D1AO60880 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SH2D1AO60880 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC13.17□□□□□ -0.3
SH2D1AO60880 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SH2D1AO60880 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SH2D1AO60880 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
SH2D1AO60880 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
SH2D1AO60880 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.17□□□□□ -0.3
SH2D1AO60880 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SH2D1AO60880 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC13.17□□□□□ -0.3
SH2D1AO60880 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SH2D1AO60880 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SH2D1AO60880 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC13.17□□□□□ -0.3
SH2D1AO60880 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SH2D1AO60880 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SH2D1AO60880 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SH2D1AO60880 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SH2D1AO60880 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SH2D1AO60880 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC13.17□□□□□ -0.3
SH2D1AO60880 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SH2D1AO60880 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SH2D1AO60880 AL355355.2-201ENST00000442321 338 ntBASIC13.17□□□□□ -0.3
SH2D1AO60880 SEC1P-202ENST00000473944 940 ntBASIC13.17□□□□□ -0.3
SH2D1AO60880 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SH2D1AO60880 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC13.17□□□□□ -0.3
SH2D1AO60880 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SH2D1AO60880 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC13.17□□□□□ -0.3
SH2D1AO60880 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SH2D1AO60880 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SH2D1AO60880 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SH2D1AO60880 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SH2D1AO60880 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SH2D1AO60880 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SH2D1AO60880 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SH2D1AO60880 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SH2D1AO60880 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
SH2D1AO60880 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SH2D1AO60880 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC13.17□□□□□ -0.3
SH2D1AO60880 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SH2D1AO60880 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC13.17□□□□□ -0.3
SH2D1AO60880 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SH2D1AO60880 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SH2D1AO60880 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SH2D1AO60880 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SH2D1AO60880 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SH2D1AO60880 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SH2D1AO60880 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
SH2D1AO60880 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.16□□□□□ -0.3
SH2D1AO60880 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SH2D1AO60880 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
SH2D1AO60880 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
SH2D1AO60880 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SH2D1AO60880 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC13.16□□□□□ -0.3
SH2D1AO60880 AC092338.2-201ENST00000568827 1415 ntBASIC13.16□□□□□ -0.3
SH2D1AO60880 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SH2D1AO60880 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SH2D1AO60880 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
SH2D1AO60880 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.16□□□□□ -0.3
SH2D1AO60880 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SH2D1AO60880 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SH2D1AO60880 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SH2D1AO60880 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SH2D1AO60880 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC13.16□□□□□ -0.3
SH2D1AO60880 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SH2D1AO60880 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SH2D1AO60880 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC13.16□□□□□ -0.3
SH2D1AO60880 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SH2D1AO60880 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SH2D1AO60880 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
SH2D1AO60880 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SH2D1AO60880 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC13.16□□□□□ -0.3
SH2D1AO60880 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SH2D1AO60880 AC005915.1-201ENST00000624912 2018 ntBASIC13.16□□□□□ -0.3
SH2D1AO60880 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
SH2D1AO60880 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SH2D1AO60880 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC13.16□□□□□ -0.3
SH2D1AO60880 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SH2D1AO60880 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SH2D1AO60880 LYSMD4-203ENST00000378904 2122 ntBASIC13.16□□□□□ -0.3
SH2D1AO60880 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SH2D1AO60880 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC13.16□□□□□ -0.3
SH2D1AO60880 KRT8P47-201ENST00000604727 1398 ntBASIC13.16□□□□□ -0.3
SH2D1AO60880 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SH2D1AO60880 FLJ38576-201ENST00000623820 2459 ntBASIC13.16□□□□□ -0.3
SH2D1AO60880 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SH2D1AO60880 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms