Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
CHKB-CPT1BH3BT56 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 AC104640.1-201ENST00000562617 2109 ntBASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 HARS-201ENST00000307633 1780 ntTSL 2 BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 GSN-206ENST00000394353 2311 ntTSL 2 BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 PHGDH-210ENST00000641115 1638 ntBASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 BEX3-202ENST00000372634 753 ntTSL 2 BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 PP12613-201ENST00000424958 2230 ntBASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 R3HDM2P2-201ENST00000401880 2116 ntBASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 AC079781.5-202ENST00000641784 3743 ntBASIC9.76□□□□□ -0.85
CHKB-CPT1BH3BT56 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 GOLGA8DP-202ENST00000341390 2184 ntBASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 AC015656.1-201ENST00000624209 3578 ntBASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 POR-209ENST00000439269 1858 ntTSL 2 BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 YBX1P4-201ENST00000392794 808 ntBASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 AC010980.1-201ENST00000587192 1142 ntBASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 AC007686.3-201ENST00000619017 3487 ntBASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 AL603756.1-201ENST00000606511 2163 ntBASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
CHKB-CPT1BH3BT56 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms