Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC15.29■□□□□ 0.04
HMX3A6NHT5 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC15.29■□□□□ 0.04
HMX3A6NHT5 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC15.29■□□□□ 0.04
HMX3A6NHT5 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMX3A6NHT5 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HMX3A6NHT5 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
HMX3A6NHT5 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.29■□□□□ 0.04
HMX3A6NHT5 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
HMX3A6NHT5 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HMX3A6NHT5 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.29■□□□□ 0.04
HMX3A6NHT5 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HMX3A6NHT5 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMX3A6NHT5 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMX3A6NHT5 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMX3A6NHT5 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMX3A6NHT5 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
HMX3A6NHT5 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.28■□□□□ 0.04
HMX3A6NHT5 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HMX3A6NHT5 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMX3A6NHT5 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMX3A6NHT5 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HMX3A6NHT5 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMX3A6NHT5 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMX3A6NHT5 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HMX3A6NHT5 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMX3A6NHT5 ESRRAP1-201ENST00000400596 1257 ntBASIC15.28■□□□□ 0.04
HMX3A6NHT5 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC15.28■□□□□ 0.04
HMX3A6NHT5 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMX3A6NHT5 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
HMX3A6NHT5 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC15.28■□□□□ 0.04
HMX3A6NHT5 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.28■□□□□ 0.04
HMX3A6NHT5 MMAB-206ENST00000540016 945 ntTSL 3 BASIC15.28■□□□□ 0.04
HMX3A6NHT5 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC15.28■□□□□ 0.04
HMX3A6NHT5 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC15.28■□□□□ 0.04
HMX3A6NHT5 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HMX3A6NHT5 MTDHP1-201ENST00000605323 784 ntBASIC15.28■□□□□ 0.04
HMX3A6NHT5 AL023875.1-201ENST00000640777 796 ntBASIC15.28■□□□□ 0.04
HMX3A6NHT5 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
HMX3A6NHT5 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMX3A6NHT5 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HMX3A6NHT5 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.28■□□□□ 0.04
HMX3A6NHT5 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMX3A6NHT5 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HMX3A6NHT5 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
HMX3A6NHT5 DBET-201ENST00000630918 3363 ntBASIC15.28■□□□□ 0.04
HMX3A6NHT5 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMX3A6NHT5 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMX3A6NHT5 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HMX3A6NHT5 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HMX3A6NHT5 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HMX3A6NHT5 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMX3A6NHT5 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMX3A6NHT5 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HMX3A6NHT5 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
HMX3A6NHT5 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC15.27■□□□□ 0.04
HMX3A6NHT5 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMX3A6NHT5 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMX3A6NHT5 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
HMX3A6NHT5 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
HMX3A6NHT5 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HMX3A6NHT5 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
HMX3A6NHT5 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMX3A6NHT5 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMX3A6NHT5 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMX3A6NHT5 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMX3A6NHT5 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HMX3A6NHT5 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC15.27■□□□□ 0.04
HMX3A6NHT5 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC15.27■□□□□ 0.04
HMX3A6NHT5 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.27■□□□□ 0.04
HMX3A6NHT5 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HMX3A6NHT5 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC15.27■□□□□ 0.04
HMX3A6NHT5 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.04
HMX3A6NHT5 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
HMX3A6NHT5 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HMX3A6NHT5 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
HMX3A6NHT5 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
HMX3A6NHT5 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HMX3A6NHT5 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
HMX3A6NHT5 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.27■□□□□ 0.03
HMX3A6NHT5 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HMX3A6NHT5 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HMX3A6NHT5 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
HMX3A6NHT5 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
HMX3A6NHT5 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMX3A6NHT5 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
HMX3A6NHT5 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMX3A6NHT5 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMX3A6NHT5 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.26■□□□□ 0.03
HMX3A6NHT5 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.26■□□□□ 0.03
HMX3A6NHT5 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.26■□□□□ 0.03
HMX3A6NHT5 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMX3A6NHT5 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.26■□□□□ 0.03
HMX3A6NHT5 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HMX3A6NHT5 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMX3A6NHT5 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMX3A6NHT5 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC15.26■□□□□ 0.03
HMX3A6NHT5 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HMX3A6NHT5 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMX3A6NHT5 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.26■□□□□ 0.03
HMX3A6NHT5 RHOD-202ENST00000532559 538 ntTSL 3 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms