Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC144AA2RUR9 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC144AA2RUR9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC144AA2RUR9 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC144AA2RUR9 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC25.12■■□□□ 1.61
CCDC144AA2RUR9 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC25.12■■□□□ 1.61
CCDC144AA2RUR9 MIR3687-2-201ENST00000577708 61 ntBASIC25.12■■□□□ 1.61
CCDC144AA2RUR9 MIR3687-1-201ENST00000614492 61 ntBASIC25.12■■□□□ 1.61
CCDC144AA2RUR9 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
CCDC144AA2RUR9 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC144AA2RUR9 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC144AA2RUR9 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC144AA2RUR9 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC144AA2RUR9 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC144AA2RUR9 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC25.11■■□□□ 1.61
CCDC144AA2RUR9 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
CCDC144AA2RUR9 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
CCDC144AA2RUR9 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
CCDC144AA2RUR9 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
CCDC144AA2RUR9 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC144AA2RUR9 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
CCDC144AA2RUR9 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC25.11■■□□□ 1.61
CCDC144AA2RUR9 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC144AA2RUR9 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
CCDC144AA2RUR9 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
CCDC144AA2RUR9 NME9-203ENST00000383180 2133 ntTSL 2 BASIC25.1■■□□□ 1.61
CCDC144AA2RUR9 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC25.1■■□□□ 1.61
CCDC144AA2RUR9 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC144AA2RUR9 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC144AA2RUR9 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC25.1■■□□□ 1.61
CCDC144AA2RUR9 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC25.1■■□□□ 1.61
CCDC144AA2RUR9 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
CCDC144AA2RUR9 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC144AA2RUR9 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC144AA2RUR9 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC144AA2RUR9 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC144AA2RUR9 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC144AA2RUR9 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC25.1■■□□□ 1.61
CCDC144AA2RUR9 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
CCDC144AA2RUR9 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC25.1■■□□□ 1.61
CCDC144AA2RUR9 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC25.1■■□□□ 1.61
CCDC144AA2RUR9 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
CCDC144AA2RUR9 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC25.09■■□□□ 1.61
CCDC144AA2RUR9 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC144AA2RUR9 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC25.09■■□□□ 1.61
CCDC144AA2RUR9 AC012317.2-201ENST00000623305 2251 ntBASIC25.09■■□□□ 1.61
CCDC144AA2RUR9 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC144AA2RUR9 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC25.09■■□□□ 1.61
CCDC144AA2RUR9 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC25.09■■□□□ 1.61
CCDC144AA2RUR9 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC144AA2RUR9 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC144AA2RUR9 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC25.09■■□□□ 1.61
CCDC144AA2RUR9 SLC25A6P5-201ENST00000435663 894 ntBASIC25.09■■□□□ 1.61
CCDC144AA2RUR9 YBX1P5-201ENST00000509441 847 ntBASIC25.09■■□□□ 1.61
CCDC144AA2RUR9 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC25.09■■□□□ 1.61
CCDC144AA2RUR9 PDPK2P-202ENST00000562415 1191 ntBASIC25.09■■□□□ 1.61
CCDC144AA2RUR9 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC144AA2RUR9 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC25.09■■□□□ 1.61
CCDC144AA2RUR9 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC25.09■■□□□ 1.61
CCDC144AA2RUR9 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC144AA2RUR9 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
CCDC144AA2RUR9 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC25.08■■□□□ 1.61
CCDC144AA2RUR9 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
CCDC144AA2RUR9 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CCDC144AA2RUR9 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CCDC144AA2RUR9 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CCDC144AA2RUR9 PC-214ENST00000628663 1470 ntTSL 5 BASIC25.08■■□□□ 1.61
CCDC144AA2RUR9 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC25.08■■□□□ 1.61
CCDC144AA2RUR9 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
CCDC144AA2RUR9 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC25.08■■□□□ 1.61
CCDC144AA2RUR9 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CCDC144AA2RUR9 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
CCDC144AA2RUR9 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CCDC144AA2RUR9 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
CCDC144AA2RUR9 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CCDC144AA2RUR9 GGCT-205ENST00000409436 954 ntTSL 3 BASIC25.08■■□□□ 1.61
CCDC144AA2RUR9 NABP1-203ENST00000409510 843 ntTSL 5 BASIC25.08■■□□□ 1.61
CCDC144AA2RUR9 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC25.08■■□□□ 1.61
CCDC144AA2RUR9 AP006288.1-201ENST00000446065 395 ntBASIC25.08■■□□□ 1.61
CCDC144AA2RUR9 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC25.08■■□□□ 1.61
CCDC144AA2RUR9 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC25.08■■□□□ 1.61
CCDC144AA2RUR9 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC25.08■■□□□ 1.61
CCDC144AA2RUR9 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC25.08■■□□□ 1.61
CCDC144AA2RUR9 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CCDC144AA2RUR9 AC134684.3-201ENST00000641758 218 ntBASIC25.08■■□□□ 1.61
CCDC144AA2RUR9 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CCDC144AA2RUR9 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CCDC144AA2RUR9 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CCDC144AA2RUR9 PI4KAP1-204ENST00000612579 1703 ntBASIC25.08■■□□□ 1.61
CCDC144AA2RUR9 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CCDC144AA2RUR9 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC25.08■■□□□ 1.6
CCDC144AA2RUR9 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
CCDC144AA2RUR9 LYSMD4-203ENST00000378904 2122 ntBASIC25.08■■□□□ 1.6
CCDC144AA2RUR9 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC25.08■■□□□ 1.6
CCDC144AA2RUR9 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC25.07■■□□□ 1.6
CCDC144AA2RUR9 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CCDC144AA2RUR9 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CCDC144AA2RUR9 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC25.07■■□□□ 1.6
CCDC144AA2RUR9 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
CCDC144AA2RUR9 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC25.07■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms