Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAI2Q9Y5P3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAI2Q9Y5P3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAI2Q9Y5P3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAI2Q9Y5P3 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.82■□□□□ 0.44
RAI2Q9Y5P3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.82■□□□□ 0.44
RAI2Q9Y5P3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
RAI2Q9Y5P3 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.82■□□□□ 0.44
RAI2Q9Y5P3 KRT18P31-201ENST00000506277 1292 ntBASIC17.82■□□□□ 0.44
RAI2Q9Y5P3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.82■□□□□ 0.44
RAI2Q9Y5P3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAI2Q9Y5P3 LINC01711-201ENST00000598340 967 ntBASIC17.82■□□□□ 0.44
RAI2Q9Y5P3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.82■□□□□ 0.44
RAI2Q9Y5P3 LINC02084-201ENST00000606069 1096 ntBASIC17.82■□□□□ 0.44
RAI2Q9Y5P3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.82■□□□□ 0.44
RAI2Q9Y5P3 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.82■□□□□ 0.44
RAI2Q9Y5P3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RAI2Q9Y5P3 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.82■□□□□ 0.44
RAI2Q9Y5P3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RAI2Q9Y5P3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAI2Q9Y5P3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAI2Q9Y5P3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAI2Q9Y5P3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAI2Q9Y5P3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAI2Q9Y5P3 LINC00304-203ENST00000565008 1864 ntBASIC17.82■□□□□ 0.44
RAI2Q9Y5P3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAI2Q9Y5P3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAI2Q9Y5P3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RAI2Q9Y5P3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RAI2Q9Y5P3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAI2Q9Y5P3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.81■□□□□ 0.44
RAI2Q9Y5P3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
RAI2Q9Y5P3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.81■□□□□ 0.44
RAI2Q9Y5P3 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RAI2Q9Y5P3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAI2Q9Y5P3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAI2Q9Y5P3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.81■□□□□ 0.44
RAI2Q9Y5P3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
RAI2Q9Y5P3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RAI2Q9Y5P3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAI2Q9Y5P3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RAI2Q9Y5P3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.81■□□□□ 0.44
RAI2Q9Y5P3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RAI2Q9Y5P3 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAI2Q9Y5P3 AC103564.2-201ENST00000432853 1299 ntBASIC17.81■□□□□ 0.44
RAI2Q9Y5P3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.81■□□□□ 0.44
RAI2Q9Y5P3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.81■□□□□ 0.44
RAI2Q9Y5P3 AL662844.1-201ENST00000546340 181 ntBASIC17.81■□□□□ 0.44
RAI2Q9Y5P3 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.81■□□□□ 0.44
RAI2Q9Y5P3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.81■□□□□ 0.44
RAI2Q9Y5P3 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.81■□□□□ 0.44
RAI2Q9Y5P3 LINC01451-201ENST00000623792 534 ntBASIC17.81■□□□□ 0.44
RAI2Q9Y5P3 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAI2Q9Y5P3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAI2Q9Y5P3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.81■□□□□ 0.44
RAI2Q9Y5P3 AC026471.1-201ENST00000564629 3026 ntBASIC17.81■□□□□ 0.44
RAI2Q9Y5P3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAI2Q9Y5P3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RAI2Q9Y5P3 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
RAI2Q9Y5P3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RAI2Q9Y5P3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAI2Q9Y5P3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RAI2Q9Y5P3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAI2Q9Y5P3 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAI2Q9Y5P3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAI2Q9Y5P3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAI2Q9Y5P3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAI2Q9Y5P3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RAI2Q9Y5P3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.8■□□□□ 0.44
RAI2Q9Y5P3 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAI2Q9Y5P3 HLA-A-201ENST00000376802 1334 ntBASIC17.8■□□□□ 0.44
RAI2Q9Y5P3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.8■□□□□ 0.44
RAI2Q9Y5P3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAI2Q9Y5P3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAI2Q9Y5P3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAI2Q9Y5P3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.8■□□□□ 0.44
RAI2Q9Y5P3 AC005104.2-201ENST00000427818 678 ntBASIC17.8■□□□□ 0.44
RAI2Q9Y5P3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.8■□□□□ 0.44
RAI2Q9Y5P3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAI2Q9Y5P3 AC019129.2-201ENST00000609837 1235 ntBASIC17.8■□□□□ 0.44
RAI2Q9Y5P3 BX640515.1-201ENST00000617215 977 ntBASIC17.8■□□□□ 0.44
RAI2Q9Y5P3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAI2Q9Y5P3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.8■□□□□ 0.44
RAI2Q9Y5P3 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAI2Q9Y5P3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAI2Q9Y5P3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAI2Q9Y5P3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAI2Q9Y5P3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.8■□□□□ 0.44
RAI2Q9Y5P3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAI2Q9Y5P3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAI2Q9Y5P3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.8■□□□□ 0.44
RAI2Q9Y5P3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAI2Q9Y5P3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAI2Q9Y5P3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAI2Q9Y5P3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAI2Q9Y5P3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.79■□□□□ 0.44
RAI2Q9Y5P3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAI2Q9Y5P3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.79■□□□□ 0.44
RAI2Q9Y5P3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.79■□□□□ 0.44
RAI2Q9Y5P3 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms