Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYNPO2Q9UMS6 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYNPO2Q9UMS6 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYNPO2Q9UMS6 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYNPO2Q9UMS6 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYNPO2Q9UMS6 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYNPO2Q9UMS6 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYNPO2Q9UMS6 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYNPO2Q9UMS6 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.16■□□□□ 0.82
SYNPO2Q9UMS6 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.16■□□□□ 0.82
SYNPO2Q9UMS6 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.16■□□□□ 0.82
SYNPO2Q9UMS6 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.16■□□□□ 0.82
SYNPO2Q9UMS6 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
SYNPO2Q9UMS6 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.16■□□□□ 0.82
SYNPO2Q9UMS6 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SYNPO2Q9UMS6 MIR4751-201ENST00000578027 74 ntBASIC20.16■□□□□ 0.82
SYNPO2Q9UMS6 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.16■□□□□ 0.82
SYNPO2Q9UMS6 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.16■□□□□ 0.82
SYNPO2Q9UMS6 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.16■□□□□ 0.82
SYNPO2Q9UMS6 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.16■□□□□ 0.82
SYNPO2Q9UMS6 AC002310.6-201ENST00000624451 1377 ntBASIC20.16■□□□□ 0.82
SYNPO2Q9UMS6 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYNPO2Q9UMS6 AIRN-201ENST00000601203 4374 ntBASIC20.16■□□□□ 0.82
SYNPO2Q9UMS6 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYNPO2Q9UMS6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYNPO2Q9UMS6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYNPO2Q9UMS6 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYNPO2Q9UMS6 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.16■□□□□ 0.82
SYNPO2Q9UMS6 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.16■□□□□ 0.82
SYNPO2Q9UMS6 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
SYNPO2Q9UMS6 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.16■□□□□ 0.82
SYNPO2Q9UMS6 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYNPO2Q9UMS6 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
SYNPO2Q9UMS6 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYNPO2Q9UMS6 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.15■□□□□ 0.82
SYNPO2Q9UMS6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SYNPO2Q9UMS6 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.15■□□□□ 0.82
SYNPO2Q9UMS6 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SYNPO2Q9UMS6 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
SYNPO2Q9UMS6 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
SYNPO2Q9UMS6 YBX2P1-201ENST00000394192 760 ntBASIC20.15■□□□□ 0.82
SYNPO2Q9UMS6 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SYNPO2Q9UMS6 PAWRP1-201ENST00000451083 565 ntBASIC20.15■□□□□ 0.82
SYNPO2Q9UMS6 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.15■□□□□ 0.82
SYNPO2Q9UMS6 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.15■□□□□ 0.82
SYNPO2Q9UMS6 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.15■□□□□ 0.82
SYNPO2Q9UMS6 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.15■□□□□ 0.82
SYNPO2Q9UMS6 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.15■□□□□ 0.82
SYNPO2Q9UMS6 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SYNPO2Q9UMS6 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.15■□□□□ 0.82
SYNPO2Q9UMS6 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.15■□□□□ 0.82
SYNPO2Q9UMS6 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYNPO2Q9UMS6 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SYNPO2Q9UMS6 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SYNPO2Q9UMS6 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.15■□□□□ 0.82
SYNPO2Q9UMS6 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYNPO2Q9UMS6 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.15■□□□□ 0.82
SYNPO2Q9UMS6 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
SYNPO2Q9UMS6 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYNPO2Q9UMS6 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.15■□□□□ 0.82
SYNPO2Q9UMS6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
SYNPO2Q9UMS6 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SYNPO2Q9UMS6 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SYNPO2Q9UMS6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
SYNPO2Q9UMS6 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SYNPO2Q9UMS6 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SYNPO2Q9UMS6 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.14■□□□□ 0.81
SYNPO2Q9UMS6 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.14■□□□□ 0.81
SYNPO2Q9UMS6 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SYNPO2Q9UMS6 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
SYNPO2Q9UMS6 UPF3AP3-201ENST00000420996 769 ntBASIC20.14■□□□□ 0.81
SYNPO2Q9UMS6 MCCD1P2-201ENST00000423228 335 ntBASIC20.14■□□□□ 0.81
SYNPO2Q9UMS6 KRT18P2-201ENST00000447938 1258 ntBASIC20.14■□□□□ 0.81
SYNPO2Q9UMS6 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SYNPO2Q9UMS6 OR7E47P-204ENST00000575924 449 ntBASIC20.14■□□□□ 0.81
SYNPO2Q9UMS6 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
SYNPO2Q9UMS6 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.14■□□□□ 0.81
SYNPO2Q9UMS6 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
SYNPO2Q9UMS6 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
SYNPO2Q9UMS6 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.14■□□□□ 0.81
SYNPO2Q9UMS6 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SYNPO2Q9UMS6 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
SYNPO2Q9UMS6 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SYNPO2Q9UMS6 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SYNPO2Q9UMS6 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.14■□□□□ 0.81
SYNPO2Q9UMS6 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SYNPO2Q9UMS6 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SYNPO2Q9UMS6 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.13■□□□□ 0.81
SYNPO2Q9UMS6 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SYNPO2Q9UMS6 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.13■□□□□ 0.81
SYNPO2Q9UMS6 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SYNPO2Q9UMS6 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.13■□□□□ 0.81
SYNPO2Q9UMS6 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SYNPO2Q9UMS6 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SYNPO2Q9UMS6 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SYNPO2Q9UMS6 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SYNPO2Q9UMS6 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SYNPO2Q9UMS6 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SYNPO2Q9UMS6 MIR1233-2-201ENST00000408138 82 ntBASIC20.13■□□□□ 0.81
SYNPO2Q9UMS6 MIR1233-1-201ENST00000408722 82 ntBASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms