Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC27.59■■■□□ 2.01
RIMBP3Q9UFD9 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
RIMBP3Q9UFD9 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC27.59■■■□□ 2.01
RIMBP3Q9UFD9 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
RIMBP3Q9UFD9 CROCCP4-201ENST00000457096 498 ntBASIC27.59■■■□□ 2.01
RIMBP3Q9UFD9 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC27.59■■■□□ 2.01
RIMBP3Q9UFD9 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC27.59■■■□□ 2.01
RIMBP3Q9UFD9 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
RIMBP3Q9UFD9 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC27.58■■■□□ 2.01
RIMBP3Q9UFD9 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC27.58■■■□□ 2.01
RIMBP3Q9UFD9 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC27.58■■■□□ 2.01
RIMBP3Q9UFD9 AC087499.5-201ENST00000452760 1342 ntBASIC27.58■■■□□ 2.01
RIMBP3Q9UFD9 AC100803.2-201ENST00000562459 1963 ntBASIC27.58■■■□□ 2.01
RIMBP3Q9UFD9 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
RIMBP3Q9UFD9 NSL1-201ENST00000366976 722 ntTSL 2 BASIC27.58■■■□□ 2.01
RIMBP3Q9UFD9 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC27.58■■■□□ 2.01
RIMBP3Q9UFD9 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC27.58■■■□□ 2.01
RIMBP3Q9UFD9 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC27.58■■■□□ 2.01
RIMBP3Q9UFD9 AC108725.1-201ENST00000495472 409 ntBASIC27.58■■■□□ 2.01
RIMBP3Q9UFD9 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC27.58■■■□□ 2.01
RIMBP3Q9UFD9 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC27.58■■■□□ 2.01
RIMBP3Q9UFD9 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC27.58■■■□□ 2.01
RIMBP3Q9UFD9 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
RIMBP3Q9UFD9 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC27.58■■■□□ 2
RIMBP3Q9UFD9 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
RIMBP3Q9UFD9 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
RIMBP3Q9UFD9 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC27.57■■■□□ 2
RIMBP3Q9UFD9 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC27.57■■■□□ 2
RIMBP3Q9UFD9 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC27.57■■■□□ 2
RIMBP3Q9UFD9 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC27.57■■■□□ 2
RIMBP3Q9UFD9 AL583810.1-201ENST00000553344 1045 ntBASIC27.57■■■□□ 2
RIMBP3Q9UFD9 NAT9-224ENST00000583757 583 ntTSL 3 BASIC27.57■■■□□ 2
RIMBP3Q9UFD9 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC27.57■■■□□ 2
RIMBP3Q9UFD9 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC27.57■■■□□ 2
RIMBP3Q9UFD9 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
RIMBP3Q9UFD9 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
RIMBP3Q9UFD9 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC27.57■■■□□ 2
RIMBP3Q9UFD9 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
RIMBP3Q9UFD9 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC27.57■■■□□ 2
RIMBP3Q9UFD9 MIR1247-201ENST00000408206 136 ntBASIC27.56■■■□□ 2
RIMBP3Q9UFD9 FXNP2-201ENST00000411625 547 ntBASIC27.56■■■□□ 2
RIMBP3Q9UFD9 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC27.56■■■□□ 2
RIMBP3Q9UFD9 ZNF767P-206ENST00000513792 565 ntBASIC27.56■■■□□ 2
RIMBP3Q9UFD9 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC27.56■■■□□ 2
RIMBP3Q9UFD9 SNX1-214ENST00000625244 324 ntTSL 5 BASIC27.56■■■□□ 2
RIMBP3Q9UFD9 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC27.56■■■□□ 2
RIMBP3Q9UFD9 AL023806.1-201ENST00000603994 1649 ntBASIC27.56■■■□□ 2
RIMBP3Q9UFD9 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC27.56■■■□□ 2
RIMBP3Q9UFD9 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC27.56■■■□□ 2
RIMBP3Q9UFD9 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
RIMBP3Q9UFD9 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC27.56■■■□□ 2
RIMBP3Q9UFD9 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
RIMBP3Q9UFD9 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC27.56■■■□□ 2
RIMBP3Q9UFD9 AC087499.6-201ENST00000411576 835 ntBASIC27.56■■■□□ 2
RIMBP3Q9UFD9 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC27.56■■■□□ 2
RIMBP3Q9UFD9 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC27.56■■■□□ 2
RIMBP3Q9UFD9 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC27.56■■■□□ 2
RIMBP3Q9UFD9 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC27.56■■■□□ 2
RIMBP3Q9UFD9 MIR4515-201ENST00000584082 81 ntBASIC27.56■■■□□ 2
RIMBP3Q9UFD9 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC27.56■■■□□ 2
RIMBP3Q9UFD9 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC27.55■■■□□ 2
RIMBP3Q9UFD9 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC27.55■■■□□ 2
RIMBP3Q9UFD9 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
RIMBP3Q9UFD9 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
RIMBP3Q9UFD9 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC27.55■■■□□ 2
RIMBP3Q9UFD9 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
RIMBP3Q9UFD9 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC27.55■■■□□ 2
RIMBP3Q9UFD9 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC27.55■■■□□ 2
RIMBP3Q9UFD9 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
RIMBP3Q9UFD9 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
RIMBP3Q9UFD9 SLC7A15P-201ENST00000424028 1363 ntBASIC27.55■■■□□ 2
RIMBP3Q9UFD9 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC27.55■■■□□ 2
RIMBP3Q9UFD9 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
RIMBP3Q9UFD9 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
RIMBP3Q9UFD9 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC27.54■■■□□ 2
RIMBP3Q9UFD9 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC27.54■■■□□ 2
RIMBP3Q9UFD9 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC27.54■■■□□ 2
RIMBP3Q9UFD9 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC27.54■■■□□ 2
RIMBP3Q9UFD9 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC27.54■■■□□ 2
RIMBP3Q9UFD9 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
RIMBP3Q9UFD9 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC27.54■■■□□ 2
RIMBP3Q9UFD9 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC27.54■■■□□ 2
RIMBP3Q9UFD9 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC27.54■■■□□ 2
RIMBP3Q9UFD9 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC27.54■■■□□ 2
RIMBP3Q9UFD9 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC27.54■■■□□ 2
RIMBP3Q9UFD9 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
RIMBP3Q9UFD9 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC27.54■■■□□ 2
RIMBP3Q9UFD9 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC27.54■■■□□ 2
RIMBP3Q9UFD9 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC27.54■■■□□ 2
RIMBP3Q9UFD9 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC27.54■■■□□ 2
RIMBP3Q9UFD9 TUBB1P2-201ENST00000422712 1306 ntBASIC27.54■■■□□ 2
RIMBP3Q9UFD9 TUBB1P1-201ENST00000503144 1300 ntBASIC27.54■■■□□ 2
RIMBP3Q9UFD9 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC27.53■■■□□ 2
RIMBP3Q9UFD9 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC27.53■■■□□ 2
RIMBP3Q9UFD9 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC27.53■■■□□ 2
RIMBP3Q9UFD9 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC27.53■■■□□ 2
RIMBP3Q9UFD9 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC27.53■■■□□ 2
RIMBP3Q9UFD9 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC27.53■■■□□ 2
RIMBP3Q9UFD9 HMGA1P7-201ENST00000406908 502 ntBASIC27.53■■■□□ 2
RIMBP3Q9UFD9 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC27.53■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms