Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 LINC00304-203ENST00000565008 1864 ntBASIC19.84■□□□□ 0.77
COL20A1Q9P218 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.84■□□□□ 0.77
COL20A1Q9P218 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.84■□□□□ 0.77
COL20A1Q9P218 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL20A1Q9P218 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL20A1Q9P218 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
COL20A1Q9P218 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.84■□□□□ 0.77
COL20A1Q9P218 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL20A1Q9P218 AC108073.2-201ENST00000464002 357 ntBASIC19.84■□□□□ 0.77
COL20A1Q9P218 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL20A1Q9P218 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.84■□□□□ 0.77
COL20A1Q9P218 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.84■□□□□ 0.77
COL20A1Q9P218 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.84■□□□□ 0.77
COL20A1Q9P218 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.84■□□□□ 0.77
COL20A1Q9P218 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.84■□□□□ 0.77
COL20A1Q9P218 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL20A1Q9P218 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL20A1Q9P218 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.84■□□□□ 0.77
COL20A1Q9P218 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL20A1Q9P218 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL20A1Q9P218 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL20A1Q9P218 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.84■□□□□ 0.77
COL20A1Q9P218 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.84■□□□□ 0.77
COL20A1Q9P218 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.84■□□□□ 0.77
COL20A1Q9P218 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.83■□□□□ 0.77
COL20A1Q9P218 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL20A1Q9P218 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL20A1Q9P218 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.83■□□□□ 0.77
COL20A1Q9P218 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.83■□□□□ 0.77
COL20A1Q9P218 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL20A1Q9P218 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
COL20A1Q9P218 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL20A1Q9P218 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.83■□□□□ 0.77
COL20A1Q9P218 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.83■□□□□ 0.77
COL20A1Q9P218 BX842568.4-201ENST00000421222 227 ntBASIC19.83■□□□□ 0.77
COL20A1Q9P218 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COL20A1Q9P218 IGHV3-65-201ENST00000523210 341 ntBASIC19.83■□□□□ 0.77
COL20A1Q9P218 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.83■□□□□ 0.77
COL20A1Q9P218 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.83■□□□□ 0.77
COL20A1Q9P218 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.83■□□□□ 0.77
COL20A1Q9P218 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COL20A1Q9P218 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
COL20A1Q9P218 AC008667.4-201ENST00000607370 168 ntBASIC19.83■□□□□ 0.77
COL20A1Q9P218 AC064836.3-201ENST00000607928 673 ntBASIC19.83■□□□□ 0.77
COL20A1Q9P218 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL20A1Q9P218 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COL20A1Q9P218 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
COL20A1Q9P218 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.83■□□□□ 0.76
COL20A1Q9P218 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.83■□□□□ 0.76
COL20A1Q9P218 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL20A1Q9P218 AL390961.4-201ENST00000623958 2535 ntBASIC19.82■□□□□ 0.76
COL20A1Q9P218 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
COL20A1Q9P218 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.82■□□□□ 0.76
COL20A1Q9P218 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL20A1Q9P218 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL20A1Q9P218 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.82■□□□□ 0.76
COL20A1Q9P218 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.82■□□□□ 0.76
COL20A1Q9P218 PTCHD3P3-201ENST00000403073 906 ntBASIC19.82■□□□□ 0.76
COL20A1Q9P218 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
COL20A1Q9P218 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.82■□□□□ 0.76
COL20A1Q9P218 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.82■□□□□ 0.76
COL20A1Q9P218 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.82■□□□□ 0.76
COL20A1Q9P218 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.82■□□□□ 0.76
COL20A1Q9P218 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.82■□□□□ 0.76
COL20A1Q9P218 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL20A1Q9P218 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL20A1Q9P218 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL20A1Q9P218 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.82■□□□□ 0.76
COL20A1Q9P218 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL20A1Q9P218 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL20A1Q9P218 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL20A1Q9P218 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL20A1Q9P218 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
COL20A1Q9P218 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
COL20A1Q9P218 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL20A1Q9P218 AL135999.2-201ENST00000622438 1686 ntBASIC19.81■□□□□ 0.76
COL20A1Q9P218 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL20A1Q9P218 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL20A1Q9P218 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.81■□□□□ 0.76
COL20A1Q9P218 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL20A1Q9P218 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL20A1Q9P218 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL20A1Q9P218 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL20A1Q9P218 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL20A1Q9P218 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.81■□□□□ 0.76
COL20A1Q9P218 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.81■□□□□ 0.76
COL20A1Q9P218 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.81■□□□□ 0.76
COL20A1Q9P218 AL805961.1-202ENST00000641562 540 ntBASIC19.81■□□□□ 0.76
COL20A1Q9P218 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL20A1Q9P218 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL20A1Q9P218 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
COL20A1Q9P218 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
COL20A1Q9P218 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL20A1Q9P218 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL20A1Q9P218 AC046185.3-201ENST00000623228 1824 ntBASIC19.81■□□□□ 0.76
COL20A1Q9P218 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.8■□□□□ 0.76
COL20A1Q9P218 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
COL20A1Q9P218 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL20A1Q9P218 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL20A1Q9P218 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms