Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.43■□□□□ 0.06
CDH20Q9HBT6 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH20Q9HBT6 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CDH20Q9HBT6 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH20Q9HBT6 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH20Q9HBT6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
CDH20Q9HBT6 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH20Q9HBT6 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.43■□□□□ 0.06
CDH20Q9HBT6 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.43■□□□□ 0.06
CDH20Q9HBT6 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
CDH20Q9HBT6 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDH20Q9HBT6 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH20Q9HBT6 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.43■□□□□ 0.06
CDH20Q9HBT6 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.43■□□□□ 0.06
CDH20Q9HBT6 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.43■□□□□ 0.06
CDH20Q9HBT6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH20Q9HBT6 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDH20Q9HBT6 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH20Q9HBT6 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDH20Q9HBT6 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH20Q9HBT6 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.42■□□□□ 0.06
CDH20Q9HBT6 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH20Q9HBT6 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH20Q9HBT6 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDH20Q9HBT6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.42■□□□□ 0.06
CDH20Q9HBT6 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDH20Q9HBT6 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH20Q9HBT6 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH20Q9HBT6 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH20Q9HBT6 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH20Q9HBT6 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDH20Q9HBT6 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH20Q9HBT6 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.42■□□□□ 0.06
CDH20Q9HBT6 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
CDH20Q9HBT6 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
CDH20Q9HBT6 AC091607.1-201ENST00000490318 1060 ntBASIC15.42■□□□□ 0.06
CDH20Q9HBT6 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.42■□□□□ 0.06
CDH20Q9HBT6 AC096582.2-201ENST00000510860 516 ntBASIC15.42■□□□□ 0.06
CDH20Q9HBT6 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH20Q9HBT6 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
CDH20Q9HBT6 AC005336.2-201ENST00000593183 939 ntBASIC15.42■□□□□ 0.06
CDH20Q9HBT6 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CDH20Q9HBT6 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.42■□□□□ 0.06
CDH20Q9HBT6 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH20Q9HBT6 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH20Q9HBT6 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDH20Q9HBT6 AC009949.1-201ENST00000623048 1830 ntBASIC15.42■□□□□ 0.06
CDH20Q9HBT6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH20Q9HBT6 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH20Q9HBT6 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.42■□□□□ 0.06
CDH20Q9HBT6 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDH20Q9HBT6 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH20Q9HBT6 AC125634.1-201ENST00000438758 1403 ntBASIC15.42■□□□□ 0.06
CDH20Q9HBT6 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDH20Q9HBT6 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDH20Q9HBT6 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.42■□□□□ 0.06
CDH20Q9HBT6 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH20Q9HBT6 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.41■□□□□ 0.06
CDH20Q9HBT6 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CDH20Q9HBT6 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CDH20Q9HBT6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDH20Q9HBT6 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH20Q9HBT6 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH20Q9HBT6 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH20Q9HBT6 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.41■□□□□ 0.06
CDH20Q9HBT6 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH20Q9HBT6 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.41■□□□□ 0.06
CDH20Q9HBT6 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.41■□□□□ 0.06
CDH20Q9HBT6 PRELID1P1-202ENST00000567272 903 ntBASIC15.41■□□□□ 0.06
CDH20Q9HBT6 AP005901.3-202ENST00000581653 237 ntBASIC15.41■□□□□ 0.06
CDH20Q9HBT6 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.41■□□□□ 0.06
CDH20Q9HBT6 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH20Q9HBT6 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH20Q9HBT6 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.41■□□□□ 0.06
CDH20Q9HBT6 BX276092.7-203ENST00000637198 1536 ntBASIC15.41■□□□□ 0.06
CDH20Q9HBT6 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH20Q9HBT6 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH20Q9HBT6 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CDH20Q9HBT6 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.41■□□□□ 0.06
CDH20Q9HBT6 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.41■□□□□ 0.06
CDH20Q9HBT6 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.41■□□□□ 0.06
CDH20Q9HBT6 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH20Q9HBT6 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDH20Q9HBT6 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.41■□□□□ 0.06
CDH20Q9HBT6 AC097374.2-201ENST00000618617 1306 ntBASIC15.41■□□□□ 0.06
CDH20Q9HBT6 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH20Q9HBT6 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH20Q9HBT6 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH20Q9HBT6 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms