Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
UPF2Q9HAU5 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
UPF2Q9HAU5 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
UPF2Q9HAU5 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.63■■□□□ 1.05
UPF2Q9HAU5 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.63■■□□□ 1.05
UPF2Q9HAU5 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.63■■□□□ 1.05
UPF2Q9HAU5 AC026471.5-201ENST00000615068 467 ntBASIC21.63■■□□□ 1.05
UPF2Q9HAU5 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.63■■□□□ 1.05
UPF2Q9HAU5 AC113410.3-201ENST00000623366 203 ntBASIC21.63■■□□□ 1.05
UPF2Q9HAU5 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
UPF2Q9HAU5 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC21.63■■□□□ 1.05
UPF2Q9HAU5 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UPF2Q9HAU5 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.63■■□□□ 1.05
UPF2Q9HAU5 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
UPF2Q9HAU5 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
UPF2Q9HAU5 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UPF2Q9HAU5 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UPF2Q9HAU5 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC21.63■■□□□ 1.05
UPF2Q9HAU5 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
UPF2Q9HAU5 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
UPF2Q9HAU5 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UPF2Q9HAU5 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
UPF2Q9HAU5 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC21.63■■□□□ 1.05
UPF2Q9HAU5 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
UPF2Q9HAU5 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UPF2Q9HAU5 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
UPF2Q9HAU5 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
UPF2Q9HAU5 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC21.62■■□□□ 1.05
UPF2Q9HAU5 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
UPF2Q9HAU5 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
UPF2Q9HAU5 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
UPF2Q9HAU5 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
UPF2Q9HAU5 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
UPF2Q9HAU5 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
UPF2Q9HAU5 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
UPF2Q9HAU5 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC21.62■■□□□ 1.05
UPF2Q9HAU5 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
UPF2Q9HAU5 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
UPF2Q9HAU5 AC012618.2-201ENST00000428058 849 ntBASIC21.62■■□□□ 1.05
UPF2Q9HAU5 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.62■■□□□ 1.05
UPF2Q9HAU5 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
UPF2Q9HAU5 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
UPF2Q9HAU5 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.62■■□□□ 1.05
UPF2Q9HAU5 MIR4651-201ENST00000582622 73 ntBASIC21.62■■□□□ 1.05
UPF2Q9HAU5 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.62■■□□□ 1.05
UPF2Q9HAU5 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.62■■□□□ 1.05
UPF2Q9HAU5 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UPF2Q9HAU5 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
UPF2Q9HAU5 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UPF2Q9HAU5 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
UPF2Q9HAU5 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UPF2Q9HAU5 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC21.62■■□□□ 1.05
UPF2Q9HAU5 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
UPF2Q9HAU5 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
UPF2Q9HAU5 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
UPF2Q9HAU5 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
UPF2Q9HAU5 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC21.61■■□□□ 1.05
UPF2Q9HAU5 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
UPF2Q9HAU5 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC21.61■■□□□ 1.05
UPF2Q9HAU5 MED29-202ENST00000594368 1471 ntTSL 2 BASIC21.61■■□□□ 1.05
UPF2Q9HAU5 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.61■■□□□ 1.05
UPF2Q9HAU5 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.61■■□□□ 1.05
UPF2Q9HAU5 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.61■■□□□ 1.05
UPF2Q9HAU5 SEC1P-202ENST00000473944 940 ntBASIC21.61■■□□□ 1.05
UPF2Q9HAU5 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.61■■□□□ 1.05
UPF2Q9HAU5 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.61■■□□□ 1.05
UPF2Q9HAU5 AL049637.2-201ENST00000641778 930 ntBASIC21.61■■□□□ 1.05
UPF2Q9HAU5 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
UPF2Q9HAU5 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
UPF2Q9HAU5 UBALD1-205ENST00000590891 2641 ntBASIC21.61■■□□□ 1.05
UPF2Q9HAU5 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
UPF2Q9HAU5 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
UPF2Q9HAU5 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC21.61■■□□□ 1.05
UPF2Q9HAU5 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
UPF2Q9HAU5 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
UPF2Q9HAU5 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
UPF2Q9HAU5 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
UPF2Q9HAU5 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
UPF2Q9HAU5 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
UPF2Q9HAU5 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UPF2Q9HAU5 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.6■■□□□ 1.05
UPF2Q9HAU5 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
UPF2Q9HAU5 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UPF2Q9HAU5 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UPF2Q9HAU5 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UPF2Q9HAU5 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
UPF2Q9HAU5 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC21.6■■□□□ 1.05
UPF2Q9HAU5 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
UPF2Q9HAU5 UNC93B2-201ENST00000285383 730 ntBASIC21.6■■□□□ 1.05
UPF2Q9HAU5 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UPF2Q9HAU5 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.6■■□□□ 1.05
UPF2Q9HAU5 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
UPF2Q9HAU5 AC092865.7-201ENST00000641832 219 ntBASIC21.6■■□□□ 1.05
UPF2Q9HAU5 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UPF2Q9HAU5 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
UPF2Q9HAU5 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
UPF2Q9HAU5 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
UPF2Q9HAU5 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC21.6■■□□□ 1.05
UPF2Q9HAU5 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
UPF2Q9HAU5 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms