Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.97■□□□□ 0.63
NXF3Q9H4D5 MED15P5-201ENST00000423150 992 ntBASIC18.97■□□□□ 0.63
NXF3Q9H4D5 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.97■□□□□ 0.63
NXF3Q9H4D5 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.97■□□□□ 0.63
NXF3Q9H4D5 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
NXF3Q9H4D5 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.97■□□□□ 0.63
NXF3Q9H4D5 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.97■□□□□ 0.63
NXF3Q9H4D5 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.97■□□□□ 0.63
NXF3Q9H4D5 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NXF3Q9H4D5 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.97■□□□□ 0.63
NXF3Q9H4D5 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NXF3Q9H4D5 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NXF3Q9H4D5 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
NXF3Q9H4D5 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NXF3Q9H4D5 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NXF3Q9H4D5 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.96■□□□□ 0.63
NXF3Q9H4D5 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.96■□□□□ 0.63
NXF3Q9H4D5 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NXF3Q9H4D5 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.96■□□□□ 0.63
NXF3Q9H4D5 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NXF3Q9H4D5 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.96■□□□□ 0.63
NXF3Q9H4D5 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.96■□□□□ 0.63
NXF3Q9H4D5 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NXF3Q9H4D5 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NXF3Q9H4D5 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NXF3Q9H4D5 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
NXF3Q9H4D5 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NXF3Q9H4D5 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.96■□□□□ 0.63
NXF3Q9H4D5 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.96■□□□□ 0.63
NXF3Q9H4D5 AC027601.4-201ENST00000611259 610 ntBASIC18.96■□□□□ 0.63
NXF3Q9H4D5 AC005593.1-201ENST00000624894 515 ntBASIC18.96■□□□□ 0.63
NXF3Q9H4D5 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NXF3Q9H4D5 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
NXF3Q9H4D5 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
NXF3Q9H4D5 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
NXF3Q9H4D5 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NXF3Q9H4D5 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
NXF3Q9H4D5 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.96■□□□□ 0.63
NXF3Q9H4D5 RNF165-205ENST00000588679 2904 ntBASIC18.96■□□□□ 0.63
NXF3Q9H4D5 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NXF3Q9H4D5 PMS2P7-201ENST00000506558 1336 ntBASIC18.96■□□□□ 0.63
NXF3Q9H4D5 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NXF3Q9H4D5 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NXF3Q9H4D5 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
NXF3Q9H4D5 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
NXF3Q9H4D5 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NXF3Q9H4D5 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
NXF3Q9H4D5 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NXF3Q9H4D5 AC097637.2-201ENST00000624096 1997 ntBASIC18.95■□□□□ 0.62
NXF3Q9H4D5 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
NXF3Q9H4D5 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.95■□□□□ 0.62
NXF3Q9H4D5 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
NXF3Q9H4D5 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NXF3Q9H4D5 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NXF3Q9H4D5 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.95■□□□□ 0.62
NXF3Q9H4D5 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NXF3Q9H4D5 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NXF3Q9H4D5 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NXF3Q9H4D5 MYCLP1-201ENST00000372451 1075 ntBASIC18.95■□□□□ 0.62
NXF3Q9H4D5 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
NXF3Q9H4D5 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.95■□□□□ 0.62
NXF3Q9H4D5 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
NXF3Q9H4D5 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NXF3Q9H4D5 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.95■□□□□ 0.62
NXF3Q9H4D5 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.95■□□□□ 0.62
NXF3Q9H4D5 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.95■□□□□ 0.62
NXF3Q9H4D5 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
NXF3Q9H4D5 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NXF3Q9H4D5 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
NXF3Q9H4D5 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
NXF3Q9H4D5 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NXF3Q9H4D5 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.95■□□□□ 0.62
NXF3Q9H4D5 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NXF3Q9H4D5 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NXF3Q9H4D5 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.95■□□□□ 0.62
NXF3Q9H4D5 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
NXF3Q9H4D5 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NXF3Q9H4D5 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
NXF3Q9H4D5 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.95■□□□□ 0.62
NXF3Q9H4D5 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.95■□□□□ 0.62
NXF3Q9H4D5 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.95■□□□□ 0.62
NXF3Q9H4D5 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NXF3Q9H4D5 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NXF3Q9H4D5 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NXF3Q9H4D5 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.94■□□□□ 0.62
NXF3Q9H4D5 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NXF3Q9H4D5 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.94■□□□□ 0.62
NXF3Q9H4D5 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NXF3Q9H4D5 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
NXF3Q9H4D5 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
NXF3Q9H4D5 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
NXF3Q9H4D5 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
NXF3Q9H4D5 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NXF3Q9H4D5 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NXF3Q9H4D5 AC007967.2-201ENST00000432613 625 ntBASIC18.94■□□□□ 0.62
NXF3Q9H4D5 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NXF3Q9H4D5 AC108751.1-201ENST00000490852 363 ntBASIC18.94■□□□□ 0.62
NXF3Q9H4D5 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.94■□□□□ 0.62
NXF3Q9H4D5 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.94■□□□□ 0.62
NXF3Q9H4D5 AL139424.1-201ENST00000607572 797 ntBASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms