Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC009336.1-201ENST00000608941 1553 ntBASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 AC079776.4-201ENST00000511039 504 ntBASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 RNA5SP419-201ENST00000515908 135 ntBASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 AL589182.2-201ENST00000619332 1049 ntBASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 AC107918.4-202ENST00000641623 219 ntBASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 HLA-J-201ENST00000462773 1622 ntBASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDK5RAP1Q96SZ6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
CDK5RAP1Q96SZ6 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDK5RAP1Q96SZ6 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.25■□□□□ 0.51
CDK5RAP1Q96SZ6 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDK5RAP1Q96SZ6 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CDK5RAP1Q96SZ6 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDK5RAP1Q96SZ6 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDK5RAP1Q96SZ6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.25■□□□□ 0.51
CDK5RAP1Q96SZ6 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CDK5RAP1Q96SZ6 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDK5RAP1Q96SZ6 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDK5RAP1Q96SZ6 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDK5RAP1Q96SZ6 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.25■□□□□ 0.51
CDK5RAP1Q96SZ6 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDK5RAP1Q96SZ6 RPS2P1-201ENST00000434010 821 ntBASIC18.25■□□□□ 0.51
CDK5RAP1Q96SZ6 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDK5RAP1Q96SZ6 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.25■□□□□ 0.51
CDK5RAP1Q96SZ6 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
CDK5RAP1Q96SZ6 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CDK5RAP1Q96SZ6 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.25■□□□□ 0.51
CDK5RAP1Q96SZ6 AC139887.3-201ENST00000568585 713 ntBASIC18.25■□□□□ 0.51
CDK5RAP1Q96SZ6 AC006557.2-201ENST00000592985 1240 ntBASIC18.25■□□□□ 0.51
CDK5RAP1Q96SZ6 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.25■□□□□ 0.51
CDK5RAP1Q96SZ6 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.25■□□□□ 0.51
CDK5RAP1Q96SZ6 AC148477.8-201ENST00000624298 468 ntBASIC18.25■□□□□ 0.51
CDK5RAP1Q96SZ6 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDK5RAP1Q96SZ6 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDK5RAP1Q96SZ6 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CDK5RAP1Q96SZ6 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDK5RAP1Q96SZ6 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDK5RAP1Q96SZ6 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDK5RAP1Q96SZ6 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.25■□□□□ 0.51
CDK5RAP1Q96SZ6 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDK5RAP1Q96SZ6 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.24■□□□□ 0.51
CDK5RAP1Q96SZ6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDK5RAP1Q96SZ6 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDK5RAP1Q96SZ6 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CDK5RAP1Q96SZ6 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDK5RAP1Q96SZ6 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDK5RAP1Q96SZ6 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDK5RAP1Q96SZ6 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDK5RAP1Q96SZ6 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDK5RAP1Q96SZ6 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDK5RAP1Q96SZ6 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.24■□□□□ 0.51
CDK5RAP1Q96SZ6 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.24■□□□□ 0.51
CDK5RAP1Q96SZ6 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CDK5RAP1Q96SZ6 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.24■□□□□ 0.51
CDK5RAP1Q96SZ6 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDK5RAP1Q96SZ6 BX640515.1-201ENST00000617215 977 ntBASIC18.24■□□□□ 0.51
CDK5RAP1Q96SZ6 AC008735.5-201ENST00000623544 497 ntBASIC18.24■□□□□ 0.51
CDK5RAP1Q96SZ6 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDK5RAP1Q96SZ6 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.24■□□□□ 0.51
CDK5RAP1Q96SZ6 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.24■□□□□ 0.51
CDK5RAP1Q96SZ6 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDK5RAP1Q96SZ6 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CDK5RAP1Q96SZ6 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDK5RAP1Q96SZ6 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
CDK5RAP1Q96SZ6 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDK5RAP1Q96SZ6 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDK5RAP1Q96SZ6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDK5RAP1Q96SZ6 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
CDK5RAP1Q96SZ6 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDK5RAP1Q96SZ6 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms