Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SPDL1Q96EA4 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SPDL1Q96EA4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.44■□□□□ 0.38
SPDL1Q96EA4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SPDL1Q96EA4 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SPDL1Q96EA4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SPDL1Q96EA4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SPDL1Q96EA4 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SPDL1Q96EA4 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SPDL1Q96EA4 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SPDL1Q96EA4 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SPDL1Q96EA4 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.43■□□□□ 0.38
SPDL1Q96EA4 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SPDL1Q96EA4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SPDL1Q96EA4 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
SPDL1Q96EA4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.43■□□□□ 0.38
SPDL1Q96EA4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SPDL1Q96EA4 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.43■□□□□ 0.38
SPDL1Q96EA4 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SPDL1Q96EA4 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SPDL1Q96EA4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SPDL1Q96EA4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SPDL1Q96EA4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
SPDL1Q96EA4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.43■□□□□ 0.38
SPDL1Q96EA4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.43■□□□□ 0.38
SPDL1Q96EA4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SPDL1Q96EA4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.43■□□□□ 0.38
SPDL1Q96EA4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.43■□□□□ 0.38
SPDL1Q96EA4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.43■□□□□ 0.38
SPDL1Q96EA4 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SPDL1Q96EA4 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SPDL1Q96EA4 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SPDL1Q96EA4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SPDL1Q96EA4 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SPDL1Q96EA4 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SPDL1Q96EA4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SPDL1Q96EA4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SPDL1Q96EA4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SPDL1Q96EA4 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SPDL1Q96EA4 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SPDL1Q96EA4 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SPDL1Q96EA4 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SPDL1Q96EA4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SPDL1Q96EA4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SPDL1Q96EA4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SPDL1Q96EA4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.42■□□□□ 0.38
SPDL1Q96EA4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPDL1Q96EA4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SPDL1Q96EA4 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SPDL1Q96EA4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SPDL1Q96EA4 AC036111.1-201ENST00000533973 1582 ntBASIC17.42■□□□□ 0.38
SPDL1Q96EA4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SPDL1Q96EA4 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
SPDL1Q96EA4 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPDL1Q96EA4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SPDL1Q96EA4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.42■□□□□ 0.38
SPDL1Q96EA4 MFAP1P1-201ENST00000442257 1255 ntBASIC17.42■□□□□ 0.38
SPDL1Q96EA4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.42■□□□□ 0.38
SPDL1Q96EA4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.42■□□□□ 0.38
SPDL1Q96EA4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.42■□□□□ 0.38
SPDL1Q96EA4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.42■□□□□ 0.38
SPDL1Q96EA4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SPDL1Q96EA4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPDL1Q96EA4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.42■□□□□ 0.38
SPDL1Q96EA4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SPDL1Q96EA4 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPDL1Q96EA4 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SPDL1Q96EA4 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPDL1Q96EA4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SPDL1Q96EA4 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SPDL1Q96EA4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SPDL1Q96EA4 LINC02228-204ENST00000642115 2962 ntBASIC17.42■□□□□ 0.38
SPDL1Q96EA4 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPDL1Q96EA4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPDL1Q96EA4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.42■□□□□ 0.38
SPDL1Q96EA4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPDL1Q96EA4 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPDL1Q96EA4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.42■□□□□ 0.38
SPDL1Q96EA4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SPDL1Q96EA4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPDL1Q96EA4 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPDL1Q96EA4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.41■□□□□ 0.38
SPDL1Q96EA4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPDL1Q96EA4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPDL1Q96EA4 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPDL1Q96EA4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPDL1Q96EA4 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.41■□□□□ 0.38
SPDL1Q96EA4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPDL1Q96EA4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.41■□□□□ 0.38
SPDL1Q96EA4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPDL1Q96EA4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPDL1Q96EA4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.41■□□□□ 0.38
SPDL1Q96EA4 AC128676.1-201ENST00000454392 318 ntBASIC17.41■□□□□ 0.38
SPDL1Q96EA4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.41■□□□□ 0.38
SPDL1Q96EA4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.41■□□□□ 0.38
SPDL1Q96EA4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.41■□□□□ 0.38
SPDL1Q96EA4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPDL1Q96EA4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.41■□□□□ 0.38
SPDL1Q96EA4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPDL1Q96EA4 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms