Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDRT4Q8N9R6 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDRT4Q8N9R6 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CDRT4Q8N9R6 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.38■□□□□ 0.21
CDRT4Q8N9R6 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDRT4Q8N9R6 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.38■□□□□ 0.21
CDRT4Q8N9R6 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDRT4Q8N9R6 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.37■□□□□ 0.21
CDRT4Q8N9R6 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.37■□□□□ 0.21
CDRT4Q8N9R6 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDRT4Q8N9R6 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDRT4Q8N9R6 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDRT4Q8N9R6 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CDRT4Q8N9R6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDRT4Q8N9R6 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDRT4Q8N9R6 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.37■□□□□ 0.21
CDRT4Q8N9R6 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.37■□□□□ 0.21
CDRT4Q8N9R6 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDRT4Q8N9R6 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.37■□□□□ 0.21
CDRT4Q8N9R6 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDRT4Q8N9R6 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
CDRT4Q8N9R6 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDRT4Q8N9R6 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.37■□□□□ 0.21
CDRT4Q8N9R6 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CDRT4Q8N9R6 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.37■□□□□ 0.21
CDRT4Q8N9R6 TOB2P1-201ENST00000469761 992 ntBASIC16.37■□□□□ 0.21
CDRT4Q8N9R6 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.37■□□□□ 0.21
CDRT4Q8N9R6 IGHV3-52-201ENST00000519770 353 ntBASIC16.37■□□□□ 0.21
CDRT4Q8N9R6 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.37■□□□□ 0.21
CDRT4Q8N9R6 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.37■□□□□ 0.21
CDRT4Q8N9R6 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CDRT4Q8N9R6 AC141586.5-201ENST00000624546 2050 ntBASIC16.37■□□□□ 0.21
CDRT4Q8N9R6 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDRT4Q8N9R6 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDRT4Q8N9R6 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
CDRT4Q8N9R6 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.37■□□□□ 0.21
CDRT4Q8N9R6 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDRT4Q8N9R6 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDRT4Q8N9R6 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
CDRT4Q8N9R6 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDRT4Q8N9R6 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CDRT4Q8N9R6 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.36■□□□□ 0.21
CDRT4Q8N9R6 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CDRT4Q8N9R6 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDRT4Q8N9R6 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.36■□□□□ 0.21
CDRT4Q8N9R6 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDRT4Q8N9R6 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.36■□□□□ 0.21
CDRT4Q8N9R6 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDRT4Q8N9R6 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDRT4Q8N9R6 AC139713.2-201ENST00000641328 2723 ntBASIC16.36■□□□□ 0.21
CDRT4Q8N9R6 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CDRT4Q8N9R6 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CDRT4Q8N9R6 LYSMD4-203ENST00000378904 2122 ntBASIC16.36■□□□□ 0.21
CDRT4Q8N9R6 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CDRT4Q8N9R6 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDRT4Q8N9R6 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CDRT4Q8N9R6 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDRT4Q8N9R6 LINC00265-3P-201ENST00000447588 903 ntBASIC16.36■□□□□ 0.21
CDRT4Q8N9R6 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.36■□□□□ 0.21
CDRT4Q8N9R6 AC091607.1-201ENST00000490318 1060 ntBASIC16.36■□□□□ 0.21
CDRT4Q8N9R6 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.36■□□□□ 0.21
CDRT4Q8N9R6 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
CDRT4Q8N9R6 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDRT4Q8N9R6 AP005901.3-202ENST00000581653 237 ntBASIC16.36■□□□□ 0.21
CDRT4Q8N9R6 AL139327.4-201ENST00000612362 153 ntBASIC16.36■□□□□ 0.21
CDRT4Q8N9R6 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.36■□□□□ 0.21
CDRT4Q8N9R6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.36■□□□□ 0.21
CDRT4Q8N9R6 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.36■□□□□ 0.21
CDRT4Q8N9R6 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDRT4Q8N9R6 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDRT4Q8N9R6 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.36■□□□□ 0.21
CDRT4Q8N9R6 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDRT4Q8N9R6 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDRT4Q8N9R6 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDRT4Q8N9R6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDRT4Q8N9R6 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
CDRT4Q8N9R6 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
CDRT4Q8N9R6 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDRT4Q8N9R6 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.35■□□□□ 0.21
CDRT4Q8N9R6 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDRT4Q8N9R6 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDRT4Q8N9R6 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDRT4Q8N9R6 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDRT4Q8N9R6 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDRT4Q8N9R6 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDRT4Q8N9R6 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
CDRT4Q8N9R6 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.35■□□□□ 0.21
CDRT4Q8N9R6 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDRT4Q8N9R6 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDRT4Q8N9R6 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.35■□□□□ 0.21
CDRT4Q8N9R6 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDRT4Q8N9R6 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.35■□□□□ 0.21
CDRT4Q8N9R6 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDRT4Q8N9R6 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDRT4Q8N9R6 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.35■□□□□ 0.21
CDRT4Q8N9R6 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.35■□□□□ 0.21
CDRT4Q8N9R6 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.35■□□□□ 0.21
CDRT4Q8N9R6 KRT17P6-201ENST00000453795 1220 ntBASIC16.35■□□□□ 0.21
CDRT4Q8N9R6 MINOS1P3-201ENST00000457048 203 ntBASIC16.35■□□□□ 0.21
CDRT4Q8N9R6 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms