Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PROM2Q8N271 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PROM2Q8N271 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PROM2Q8N271 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PROM2Q8N271 ATP5G2P4-201ENST00000442175 420 ntBASIC22.28■■□□□ 1.16
PROM2Q8N271 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC22.28■■□□□ 1.16
PROM2Q8N271 RN7SL692P-201ENST00000464677 288 ntBASIC22.28■■□□□ 1.16
PROM2Q8N271 AC004890.2-204ENST00000481968 304 ntBASIC22.28■■□□□ 1.16
PROM2Q8N271 SLC25A6P2-201ENST00000497974 877 ntBASIC22.28■■□□□ 1.16
PROM2Q8N271 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
PROM2Q8N271 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC22.28■■□□□ 1.16
PROM2Q8N271 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC22.28■■□□□ 1.16
PROM2Q8N271 AL135744.1-201ENST00000565098 629 ntBASIC22.28■■□□□ 1.16
PROM2Q8N271 MIR6799-201ENST00000620297 69 ntBASIC22.28■■□□□ 1.16
PROM2Q8N271 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PROM2Q8N271 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC22.28■■□□□ 1.16
PROM2Q8N271 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC22.28■■□□□ 1.16
PROM2Q8N271 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PROM2Q8N271 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PROM2Q8N271 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PROM2Q8N271 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PROM2Q8N271 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PROM2Q8N271 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PROM2Q8N271 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PROM2Q8N271 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PROM2Q8N271 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC22.27■■□□□ 1.16
PROM2Q8N271 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PROM2Q8N271 PIN1P1-201ENST00000412108 996 ntBASIC22.27■■□□□ 1.16
PROM2Q8N271 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC22.27■■□□□ 1.16
PROM2Q8N271 AL512638.1-201ENST00000457493 794 ntBASIC22.27■■□□□ 1.16
PROM2Q8N271 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC22.27■■□□□ 1.16
PROM2Q8N271 AC027307.3-201ENST00000594262 1100 ntBASIC22.27■■□□□ 1.16
PROM2Q8N271 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC22.27■■□□□ 1.16
PROM2Q8N271 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PROM2Q8N271 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PROM2Q8N271 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
PROM2Q8N271 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC22.26■■□□□ 1.15
PROM2Q8N271 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PROM2Q8N271 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC22.26■■□□□ 1.15
PROM2Q8N271 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PROM2Q8N271 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PROM2Q8N271 RN7SL589P-201ENST00000481268 310 ntBASIC22.26■■□□□ 1.15
PROM2Q8N271 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC22.26■■□□□ 1.15
PROM2Q8N271 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC22.26■■□□□ 1.15
PROM2Q8N271 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC22.26■■□□□ 1.15
PROM2Q8N271 AL606495.2-201ENST00000605867 535 ntBASIC22.26■■□□□ 1.15
PROM2Q8N271 AC084121.4-201ENST00000641598 221 ntBASIC22.26■■□□□ 1.15
PROM2Q8N271 AF228730.8-201ENST00000642140 221 ntBASIC22.26■■□□□ 1.15
PROM2Q8N271 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PROM2Q8N271 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
PROM2Q8N271 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC22.26■■□□□ 1.15
PROM2Q8N271 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PROM2Q8N271 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PROM2Q8N271 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PROM2Q8N271 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PROM2Q8N271 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PROM2Q8N271 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PROM2Q8N271 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PROM2Q8N271 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PROM2Q8N271 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PROM2Q8N271 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PROM2Q8N271 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
PROM2Q8N271 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PROM2Q8N271 PPP6R2P1-201ENST00000450880 1275 ntBASIC22.25■■□□□ 1.15
PROM2Q8N271 AC010326.4-201ENST00000604665 891 ntBASIC22.25■■□□□ 1.15
PROM2Q8N271 BSG-214ENST00000614867 960 ntTSL 3 BASIC22.25■■□□□ 1.15
PROM2Q8N271 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PROM2Q8N271 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
PROM2Q8N271 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
PROM2Q8N271 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC22.25■■□□□ 1.15
PROM2Q8N271 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PROM2Q8N271 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PROM2Q8N271 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC22.25■■□□□ 1.15
PROM2Q8N271 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC22.24■■□□□ 1.15
PROM2Q8N271 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC22.24■■□□□ 1.15
PROM2Q8N271 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC22.24■■□□□ 1.15
PROM2Q8N271 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PROM2Q8N271 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PROM2Q8N271 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
PROM2Q8N271 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PROM2Q8N271 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PROM2Q8N271 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC22.24■■□□□ 1.15
PROM2Q8N271 AC245100.3-201ENST00000441281 285 ntBASIC22.24■■□□□ 1.15
PROM2Q8N271 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC22.24■■□□□ 1.15
PROM2Q8N271 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC22.24■■□□□ 1.15
PROM2Q8N271 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC22.24■■□□□ 1.15
PROM2Q8N271 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC22.24■■□□□ 1.15
PROM2Q8N271 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC22.24■■□□□ 1.15
PROM2Q8N271 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PROM2Q8N271 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PROM2Q8N271 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PROM2Q8N271 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC22.23■■□□□ 1.15
PROM2Q8N271 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC22.23■■□□□ 1.15
PROM2Q8N271 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PROM2Q8N271 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PROM2Q8N271 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC22.23■■□□□ 1.15
PROM2Q8N271 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC22.23■■□□□ 1.15
PROM2Q8N271 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PROM2Q8N271 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC22.23■■□□□ 1.15
PROM2Q8N271 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms