Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LCA10Q71F78 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
LCA10Q71F78 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
LCA10Q71F78 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
LCA10Q71F78 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
LCA10Q71F78 SERPINH1P1-201ENST00000419794 1249 ntBASIC9.54□□□□□ -0.88
LCA10Q71F78 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
LCA10Q71F78 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
LCA10Q71F78 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LCA10Q71F78 PHB2-213ENST00000546111 858 ntTSL 2 BASIC9.54□□□□□ -0.88
LCA10Q71F78 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC9.54□□□□□ -0.88
LCA10Q71F78 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC9.54□□□□□ -0.88
LCA10Q71F78 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC9.54□□□□□ -0.88
LCA10Q71F78 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LCA10Q71F78 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
LCA10Q71F78 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
LCA10Q71F78 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
LCA10Q71F78 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC9.54□□□□□ -0.88
LCA10Q71F78 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
LCA10Q71F78 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
LCA10Q71F78 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
LCA10Q71F78 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LCA10Q71F78 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC9.54□□□□□ -0.88
LCA10Q71F78 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
LCA10Q71F78 USP39-202ENST00000409025 1946 ntTSL 5 BASIC9.54□□□□□ -0.88
LCA10Q71F78 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
LCA10Q71F78 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC9.54□□□□□ -0.88
LCA10Q71F78 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LCA10Q71F78 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC9.54□□□□□ -0.88
LCA10Q71F78 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LCA10Q71F78 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
LCA10Q71F78 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
LCA10Q71F78 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LCA10Q71F78 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LCA10Q71F78 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LCA10Q71F78 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LCA10Q71F78 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC9.54□□□□□ -0.88
LCA10Q71F78 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC9.54□□□□□ -0.88
LCA10Q71F78 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
LCA10Q71F78 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
LCA10Q71F78 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
LCA10Q71F78 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
LCA10Q71F78 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LCA10Q71F78 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
LCA10Q71F78 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
LCA10Q71F78 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LCA10Q71F78 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
LCA10Q71F78 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
LCA10Q71F78 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC9.53□□□□□ -0.88
LCA10Q71F78 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
LCA10Q71F78 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LCA10Q71F78 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
LCA10Q71F78 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
LCA10Q71F78 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC9.53□□□□□ -0.88
LCA10Q71F78 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC9.53□□□□□ -0.88
LCA10Q71F78 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
LCA10Q71F78 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC9.53□□□□□ -0.88
LCA10Q71F78 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
LCA10Q71F78 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC9.53□□□□□ -0.88
LCA10Q71F78 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
LCA10Q71F78 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LCA10Q71F78 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
LCA10Q71F78 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC9.53□□□□□ -0.88
LCA10Q71F78 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LCA10Q71F78 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC9.53□□□□□ -0.88
LCA10Q71F78 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC9.53□□□□□ -0.88
LCA10Q71F78 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC9.53□□□□□ -0.88
LCA10Q71F78 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
LCA10Q71F78 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC9.53□□□□□ -0.88
LCA10Q71F78 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
LCA10Q71F78 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
LCA10Q71F78 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
LCA10Q71F78 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LCA10Q71F78 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC9.53□□□□□ -0.88
LCA10Q71F78 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LCA10Q71F78 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LCA10Q71F78 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC9.53□□□□□ -0.88
LCA10Q71F78 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LCA10Q71F78 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
LCA10Q71F78 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC9.53□□□□□ -0.88
LCA10Q71F78 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
LCA10Q71F78 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC9.53□□□□□ -0.88
LCA10Q71F78 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
LCA10Q71F78 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LCA10Q71F78 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LCA10Q71F78 WT1-209ENST00000530998 2421 ntTSL 2 BASIC9.53□□□□□ -0.88
LCA10Q71F78 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LCA10Q71F78 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC9.53□□□□□ -0.88
LCA10Q71F78 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
LCA10Q71F78 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
LCA10Q71F78 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
LCA10Q71F78 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC9.53□□□□□ -0.88
LCA10Q71F78 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LCA10Q71F78 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
LCA10Q71F78 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
LCA10Q71F78 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
LCA10Q71F78 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC9.53□□□□□ -0.88
LCA10Q71F78 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC9.53□□□□□ -0.88
LCA10Q71F78 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
LCA10Q71F78 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC9.52□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms